Parse and store the faceted fields

This commit is contained in:
Clément Renault 2020-11-13 14:49:48 +01:00
parent 4e5e55c21a
commit a18d9a1f87
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GPG Key ID: 92ADA4E935E71FA4
6 changed files with 262 additions and 24 deletions

17
Cargo.lock generated
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@ -550,6 +550,12 @@ dependencies = [
"cfg-if 0.1.10",
]
[[package]]
name = "maplit"
version = "1.0.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3e2e65a1a2e43cfcb47a895c4c8b10d1f4a61097f9f254f183aee60cad9c651d"
[[package]]
name = "matches"
version = "0.1.8"
@ -608,10 +614,12 @@ dependencies = [
"levenshtein_automata",
"linked-hash-map",
"log",
"maplit",
"memmap",
"near-proximity",
"obkv",
"once_cell",
"ordered-float",
"rayon",
"ringtail",
"roaring",
@ -708,6 +716,15 @@ version = "11.1.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a170cebd8021a008ea92e4db85a72f80b35df514ec664b296fdcbb654eac0b2c"
[[package]]
name = "ordered-float"
version = "2.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9fe9037165d7023b1228bc4ae9a2fa1a2b0095eca6c2998c624723dfd01314a5"
dependencies = [
"num-traits",
]
[[package]]
name = "page_size"
version = "0.4.2"

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@ -23,6 +23,7 @@ memmap = "0.7.0"
near-proximity = { git = "https://github.com/Kerollmops/plane-sweep-proximity", rev = "6608205" }
obkv = "0.1.0"
once_cell = "1.4.0"
ordered-float = "2.0.0"
rayon = "1.3.1"
ringtail = "0.3.0"
roaring = "0.6.1"
@ -44,6 +45,7 @@ stderrlog = "0.5.0"
[dev-dependencies]
criterion = "0.3.3"
maplit = "1.0.2"
[build-dependencies]
fst = "0.4.4"

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@ -34,6 +34,7 @@ pub type FastMap8<K, V> = HashMap<K, V, BuildHasherDefault<FxHasher64>>;
pub type SmallString32 = smallstr::SmallString<[u8; 32]>;
pub type SmallVec32<T> = smallvec::SmallVec<[T; 32]>;
pub type SmallVec16<T> = smallvec::SmallVec<[T; 16]>;
pub type SmallVec8<T> = smallvec::SmallVec<[T; 8]>;
pub type BEU32 = heed::zerocopy::U32<heed::byteorder::BE>;
pub type BEU64 = heed::zerocopy::U64<heed::byteorder::BE>;
pub type DocumentId = u32;

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@ -16,10 +16,10 @@ use rayon::ThreadPool;
use crate::index::Index;
use crate::update::UpdateIndexingStep;
use self::store::Store;
use self::store::{Store, Readers};
use self::merge_function::{
main_merge, word_docids_merge, words_pairs_proximities_docids_merge,
docid_word_positions_merge, documents_merge,
docid_word_positions_merge, documents_merge, facet_field_value_docids_merge,
};
pub use self::transform::{Transform, TransformOutput};
@ -327,6 +327,7 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
enum DatabaseType {
Main,
WordDocids,
FacetValuesDocids,
}
let faceted_fields = self.index.faceted_fields(self.wtxn)?;
@ -386,13 +387,23 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
let mut word_docids_readers = Vec::with_capacity(readers.len());
let mut docid_word_positions_readers = Vec::with_capacity(readers.len());
let mut words_pairs_proximities_docids_readers = Vec::with_capacity(readers.len());
let mut facet_field_value_docids_readers = Vec::with_capacity(readers.len());
let mut documents_readers = Vec::with_capacity(readers.len());
readers.into_iter().for_each(|readers| {
main_readers.push(readers.main);
word_docids_readers.push(readers.word_docids);
docid_word_positions_readers.push(readers.docid_word_positions);
words_pairs_proximities_docids_readers.push(readers.words_pairs_proximities_docids);
documents_readers.push(readers.documents);
let Readers {
main,
word_docids,
docid_word_positions,
words_pairs_proximities_docids,
facet_field_value_docids,
documents
} = readers;
main_readers.push(main);
word_docids_readers.push(word_docids);
docid_word_positions_readers.push(docid_word_positions);
words_pairs_proximities_docids_readers.push(words_pairs_proximities_docids);
facet_field_value_docids_readers.push(facet_field_value_docids);
documents_readers.push(documents);
});
// This is the function that merge the readers
@ -415,6 +426,11 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
vec![
(DatabaseType::Main, main_readers, main_merge as MergeFn),
(DatabaseType::WordDocids, word_docids_readers, word_docids_merge),
(
DatabaseType::FacetValuesDocids,
facet_field_value_docids_readers,
facet_field_value_docids_merge,
),
]
.into_par_iter()
.for_each(|(dbtype, readers, merge)| {
@ -465,9 +481,11 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
self.index.put_documents_ids(self.wtxn, &documents_ids)?;
let mut database_count = 0;
let total_databases = 6;
progress_callback(UpdateIndexingStep::MergeDataIntoFinalDatabase {
databases_seen: 0,
total_databases: 5,
total_databases,
});
debug!("Writing the docid word positions into LMDB on disk...");
@ -482,7 +500,7 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
database_count += 1;
progress_callback(UpdateIndexingStep::MergeDataIntoFinalDatabase {
databases_seen: database_count,
total_databases: 5,
total_databases,
});
debug!("Writing the documents into LMDB on disk...");
@ -497,7 +515,7 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
database_count += 1;
progress_callback(UpdateIndexingStep::MergeDataIntoFinalDatabase {
databases_seen: database_count,
total_databases: 5,
total_databases,
});
debug!("Writing the words pairs proximities docids into LMDB on disk...");
@ -512,7 +530,7 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
database_count += 1;
progress_callback(UpdateIndexingStep::MergeDataIntoFinalDatabase {
databases_seen: database_count,
total_databases: 5,
total_databases,
});
for (db_type, result) in receiver {
@ -539,16 +557,27 @@ impl<'t, 'u, 'i, 'a> IndexDocuments<'t, 'u, 'i, 'a> {
write_method,
)?;
},
DatabaseType::FacetValuesDocids => {
debug!("Writing the facet values docids into LMDB on disk...");
let db = *self.index.facet_field_id_value_docids.as_polymorph();
write_into_lmdb_database(
self.wtxn,
db,
content,
facet_field_value_docids_merge,
write_method,
)?;
},
}
database_count += 1;
progress_callback(UpdateIndexingStep::MergeDataIntoFinalDatabase {
databases_seen: database_count,
total_databases: 5,
total_databases,
});
}
debug_assert_eq!(database_count, 5);
debug_assert_eq!(database_count, total_databases);
info!("Transform output indexed in {:.02?}", before_indexing.elapsed());

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@ -1,3 +1,4 @@
use std::borrow::Cow;
use std::collections::{BTreeMap, HashMap, HashSet};
use std::convert::{TryFrom, TryInto};
use std::fs::File;
@ -5,23 +6,29 @@ use std::iter::FromIterator;
use std::time::Instant;
use std::{cmp, iter};
use anyhow::Context;
use anyhow::{bail, Context};
use bstr::ByteSlice as _;
use grenad::{Reader, FileFuse, Writer, Sorter, CompressionType};
use heed::BytesEncode;
use linked_hash_map::LinkedHashMap;
use log::{debug, info};
use grenad::{Reader, FileFuse, Writer, Sorter, CompressionType};
use ordered_float::OrderedFloat;
use roaring::RoaringBitmap;
use serde_json::Value;
use tempfile::tempfile;
use crate::facet::FacetType;
use crate::heed_codec::{BoRoaringBitmapCodec, CboRoaringBitmapCodec};
use crate::heed_codec::facet::{FacetValueStringCodec, FacetValueF64Codec, FacetValueI64Codec};
use crate::tokenizer::{simple_tokenizer, only_token};
use crate::update::UpdateIndexingStep;
use crate::{json_to_string, SmallVec32, Position, DocumentId};
use crate::{json_to_string, SmallVec8, SmallVec32, SmallString32, Position, DocumentId};
use super::{MergeFn, create_writer, create_sorter, writer_into_reader};
use super::merge_function::{main_merge, word_docids_merge, words_pairs_proximities_docids_merge};
use super::merge_function::{
main_merge, word_docids_merge, words_pairs_proximities_docids_merge,
facet_field_value_docids_merge,
};
const LMDB_MAX_KEY_LENGTH: usize = 511;
const ONE_KILOBYTE: usize = 1024 * 1024;
@ -34,6 +41,7 @@ pub struct Readers {
pub word_docids: Reader<FileFuse>,
pub docid_word_positions: Reader<FileFuse>,
pub words_pairs_proximities_docids: Reader<FileFuse>,
pub facet_field_value_docids: Reader<FileFuse>,
pub documents: Reader<FileFuse>,
}
@ -46,6 +54,8 @@ pub struct Store {
word_docids_limit: usize,
words_pairs_proximities_docids: LinkedHashMap<(SmallVec32<u8>, SmallVec32<u8>, u8), RoaringBitmap>,
words_pairs_proximities_docids_limit: usize,
facet_field_value_docids: LinkedHashMap<(u8, FacetValue), RoaringBitmap>,
facet_field_value_docids_limit: usize,
// MTBL parameters
chunk_compression_type: CompressionType,
chunk_compression_level: Option<u32>,
@ -54,6 +64,7 @@ pub struct Store {
main_sorter: Sorter<MergeFn>,
word_docids_sorter: Sorter<MergeFn>,
words_pairs_proximities_docids_sorter: Sorter<MergeFn>,
facet_field_value_docids_sorter: Sorter<MergeFn>,
// MTBL writers
docid_word_positions_writer: Writer<File>,
documents_writer: Writer<File>,
@ -72,7 +83,7 @@ impl Store {
) -> anyhow::Result<Store>
{
// We divide the max memory by the number of sorter the Store have.
let max_memory = max_memory.map(|mm| cmp::max(ONE_KILOBYTE, mm / 3));
let max_memory = max_memory.map(|mm| cmp::max(ONE_KILOBYTE, mm / 4));
let linked_hash_map_size = linked_hash_map_size.unwrap_or(500);
let main_sorter = create_sorter(
@ -99,6 +110,14 @@ impl Store {
max_nb_chunks,
max_memory,
);
let facet_field_value_docids_sorter = create_sorter(
facet_field_value_docids_merge,
chunk_compression_type,
chunk_compression_level,
chunk_fusing_shrink_size,
max_nb_chunks,
max_memory,
);
let documents_writer = tempfile().and_then(|f| {
create_writer(chunk_compression_type, chunk_compression_level, f)
@ -116,6 +135,8 @@ impl Store {
word_docids_limit: linked_hash_map_size,
words_pairs_proximities_docids: LinkedHashMap::with_capacity(linked_hash_map_size),
words_pairs_proximities_docids_limit: linked_hash_map_size,
facet_field_value_docids: LinkedHashMap::with_capacity(linked_hash_map_size),
facet_field_value_docids_limit: linked_hash_map_size,
// MTBL parameters
chunk_compression_type,
chunk_compression_level,
@ -124,6 +145,7 @@ impl Store {
main_sorter,
word_docids_sorter,
words_pairs_proximities_docids_sorter,
facet_field_value_docids_sorter,
// MTBL writers
docid_word_positions_writer,
documents_writer,
@ -151,6 +173,35 @@ impl Store {
Ok(())
}
// Save the documents ids under the facet field id and value we have seen it.
fn insert_facet_values_docid(
&mut self,
field_id: u8,
field_value: FacetValue,
id: DocumentId,
) -> anyhow::Result<()>
{
let key = (field_id, field_value);
// if get_refresh finds the element it is assured to be at the end of the linked hash map.
match self.facet_field_value_docids.get_refresh(&key) {
Some(old) => { old.insert(id); },
None => {
// A newly inserted element is append at the end of the linked hash map.
self.facet_field_value_docids.insert(key, RoaringBitmap::from_iter(Some(id)));
// If the word docids just reached it's capacity we must make sure to remove
// one element, this way next time we insert we doesn't grow the capacity.
if self.facet_field_value_docids.len() == self.facet_field_value_docids_limit {
// Removing the front element is equivalent to removing the LRU element.
Self::write_docid_facet_field_values(
&mut self.facet_field_value_docids_sorter,
self.facet_field_value_docids.pop_front(),
)?;
}
}
}
Ok(())
}
// Save the documents ids under the words pairs proximities that it contains.
fn insert_words_pairs_proximities_docids<'a>(
&mut self,
@ -191,7 +242,8 @@ impl Store {
fn write_document(
&mut self,
document_id: DocumentId,
words_positions: &HashMap<String, SmallVec32<Position>>,
words_positions: &mut HashMap<String, SmallVec32<Position>>,
facet_values: &mut HashMap<u8, SmallVec8<FacetValue>>,
record: &[u8],
) -> anyhow::Result<()>
{
@ -200,13 +252,20 @@ impl Store {
self.insert_words_pairs_proximities_docids(words_pair_proximities, document_id)?;
// We store document_id associated with all the words the record contains.
for (word, _) in words_positions {
self.insert_word_docid(word, document_id)?;
for (word, _) in words_positions.drain() {
self.insert_word_docid(&word, document_id)?;
}
self.documents_writer.insert(document_id.to_be_bytes(), record)?;
Self::write_docid_word_positions(&mut self.docid_word_positions_writer, document_id, words_positions)?;
// We store document_id associated with all the field id and values.
for (field, values) in facet_values.drain() {
for value in values {
self.insert_facet_values_docid(field, value, document_id)?;
}
}
Ok(())
}
@ -267,6 +326,31 @@ impl Store {
Ok(())
}
fn write_docid_facet_field_values<I>(
sorter: &mut Sorter<MergeFn>,
iter: I,
) -> anyhow::Result<()>
where I: IntoIterator<Item=((u8, FacetValue), RoaringBitmap)>
{
use FacetValue::*;
for ((field_id, value), docids) in iter {
let result = match value {
String(s) => FacetValueStringCodec::bytes_encode(&(field_id, &s)).map(Cow::into_owned),
Float(f) => FacetValueF64Codec::bytes_encode(&(field_id, *f)).map(Cow::into_owned),
Integer(i) => FacetValueI64Codec::bytes_encode(&(field_id, i)).map(Cow::into_owned),
};
let key = result.context("could not serialize facet key")?;
let bytes = CboRoaringBitmapCodec::bytes_encode(&docids)
.context("could not serialize docids")?;
if lmdb_key_valid_size(&key) {
sorter.insert(&key, &bytes)?;
}
}
Ok(())
}
fn write_word_docids<I>(sorter: &mut Sorter<MergeFn>, iter: I) -> anyhow::Result<()>
where I: IntoIterator<Item=(SmallVec32<u8>, RoaringBitmap)>
{
@ -305,6 +389,7 @@ impl Store {
let mut before = Instant::now();
let mut words_positions = HashMap::new();
let mut facet_values = HashMap::new();
let mut count: usize = 0;
while let Some((key, value)) = documents.next()? {
@ -328,7 +413,10 @@ impl Store {
let value = serde_json::from_slice(content)?;
if let Some(ftype) = self.faceted_fields.get(&attr) {
todo!("parse facet field value")
let mut values = parse_facet_value(*ftype, &value).with_context(|| {
format!("extracting facets from the value {}", value)
})?;
facet_values.entry(attr).or_insert_with(SmallVec8::new).extend(values.drain(..));
}
if self.searchable_fields.contains(&attr) {
@ -348,8 +436,7 @@ impl Store {
}
// We write the document in the documents store.
self.write_document(document_id, &words_positions, value)?;
words_positions.clear();
self.write_document(document_id, &mut words_positions, &mut facet_values, value)?;
}
// Compute the document id of the next document.
@ -376,6 +463,10 @@ impl Store {
&mut self.words_pairs_proximities_docids_sorter,
self.words_pairs_proximities_docids,
)?;
Self::write_docid_facet_field_values(
&mut self.facet_field_value_docids_sorter,
self.facet_field_value_docids,
)?;
let mut word_docids_wtr = tempfile().and_then(|f| create_writer(comp_type, comp_level, f))?;
let mut builder = fst::SetBuilder::memory();
@ -397,9 +488,13 @@ impl Store {
let mut words_pairs_proximities_docids_wtr = tempfile().and_then(|f| create_writer(comp_type, comp_level, f))?;
self.words_pairs_proximities_docids_sorter.write_into(&mut words_pairs_proximities_docids_wtr)?;
let mut facet_field_value_docids_wtr = tempfile().and_then(|f| create_writer(comp_type, comp_level, f))?;
self.facet_field_value_docids_sorter.write_into(&mut facet_field_value_docids_wtr)?;
let main = writer_into_reader(main_wtr, shrink_size)?;
let word_docids = writer_into_reader(word_docids_wtr, shrink_size)?;
let words_pairs_proximities_docids = writer_into_reader(words_pairs_proximities_docids_wtr, shrink_size)?;
let facet_field_value_docids = writer_into_reader(facet_field_value_docids_wtr, shrink_size)?;
let docid_word_positions = writer_into_reader(self.docid_word_positions_writer, shrink_size)?;
let documents = writer_into_reader(self.documents_writer, shrink_size)?;
@ -408,6 +503,7 @@ impl Store {
word_docids,
docid_word_positions,
words_pairs_proximities_docids,
facet_field_value_docids,
documents,
})
}
@ -453,3 +549,68 @@ fn format_count(n: usize) -> String {
fn lmdb_key_valid_size(key: &[u8]) -> bool {
!key.is_empty() && key.len() <= LMDB_MAX_KEY_LENGTH
}
#[derive(Debug, Clone, PartialEq, Eq, Hash)]
enum FacetValue {
String(SmallString32),
Float(OrderedFloat<f64>),
Integer(i64),
}
fn parse_facet_value(ftype: FacetType, value: &Value) -> anyhow::Result<SmallVec8<FacetValue>> {
use FacetValue::*;
fn inner_parse_facet_value(
ftype: FacetType,
value: &Value,
can_recurse: bool,
output: &mut SmallVec8<FacetValue>,
) -> anyhow::Result<()>
{
match value {
Value::Null => Ok(()),
Value::Bool(b) => Ok(output.push(Integer(*b as i64))),
Value::Number(number) => match ftype {
FacetType::String => bail!("invalid facet type, expecting {} found number", ftype),
FacetType::Float => match number.as_f64() {
Some(float) => Ok(output.push(Float(OrderedFloat(float)))),
None => bail!("invalid facet type, expecting {} found integer", ftype),
},
FacetType::Integer => match number.as_i64() {
Some(integer) => Ok(output.push(Integer(integer))),
None => if number.is_f64() {
bail!("invalid facet type, expecting {} found float", ftype)
} else {
bail!("invalid facet type, expecting {} found out-of-bound integer (64bit)", ftype)
},
},
},
Value::String(string) => {
match ftype {
FacetType::String => {
let string = SmallString32::from(string.as_str());
Ok(output.push(String(string)))
},
FacetType::Float => match string.parse() {
Ok(float) => Ok(output.push(Float(OrderedFloat(float)))),
Err(_err) => bail!("invalid facet type, expecting {} found string", ftype),
},
FacetType::Integer => match string.parse() {
Ok(integer) => Ok(output.push(Integer(integer))),
Err(_err) => bail!("invalid facet type, expecting {} found string", ftype),
},
}
},
Value::Array(values) => if can_recurse {
values.iter().map(|v| inner_parse_facet_value(ftype, v, false, output)).collect()
} else {
bail!("invalid facet type, expecting {} found sub-array ()", ftype)
},
Value::Object(_) => bail!("invalid facet type, expecting {} found object", ftype),
}
}
let mut facet_values = SmallVec8::new();
inner_parse_facet_value(ftype, value, true, &mut facet_values)?;
Ok(facet_values)
}

View File

@ -306,6 +306,7 @@ mod tests {
use super::*;
use crate::update::{IndexDocuments, UpdateFormat};
use heed::EnvOpenOptions;
use maplit::hashmap;
#[test]
fn set_and_reset_searchable_fields() {
@ -473,4 +474,31 @@ mod tests {
assert_eq!(fields_ids, None);
drop(rtxn);
}
#[test]
fn set_faceted_fields() {
let path = tempfile::tempdir().unwrap();
let mut options = EnvOpenOptions::new();
options.map_size(10 * 1024 * 1024); // 10 MB
let index = Index::new(options, &path).unwrap();
// Set the faceted fields to be the age.
let mut wtxn = index.write_txn().unwrap();
let mut builder = Settings::new(&mut wtxn, &index);
builder.set_faceted_fields(hashmap!{ "age".into() => "integer".into() });
builder.execute(|_| ()).unwrap();
// Then index some documents.
let content = &b"name,age\nkevin,23\nkevina,21\nbenoit,34\n"[..];
let mut builder = IndexDocuments::new(&mut wtxn, &index);
builder.update_format(UpdateFormat::Csv);
builder.execute(content, |_| ()).unwrap();
wtxn.commit().unwrap();
// Check that the displayed fields are correctly set.
let rtxn = index.read_txn().unwrap();
let fields_ids = index.faceted_fields(&rtxn).unwrap();
assert_eq!(fields_ids, hashmap!{ 0 => FacetType::Integer });
drop(rtxn);
}
}