Optimize cbo roaring bitmaps merge

This commit is contained in:
many 2021-08-26 15:56:24 +02:00
parent 8f702828ca
commit 9452fabfb2
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GPG key ID: 2CEF23B75189EACA
3 changed files with 93 additions and 51 deletions

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@ -52,6 +52,46 @@ impl CboRoaringBitmapCodec {
RoaringBitmap::deserialize_from(bytes)
}
}
/// Merge serialized CboRoaringBitmaps in a buffer.
///
/// if the merged values len is under the threshold,
/// values are directly serialized in the buffer;
/// else a RoaringBitmap is created from the values and is serialized in the buffer.
pub fn merge_into(slices: &[Cow<[u8]>], buffer: &mut Vec<u8>) -> io::Result<()> {
let mut roaring = RoaringBitmap::new();
let mut vec = Vec::new();
for bytes in slices {
if bytes.len() <= THRESHOLD * size_of::<u32>() {
let mut reader = bytes.as_ref();
while let Ok(integer) = reader.read_u32::<NativeEndian>() {
vec.push(integer);
}
} else {
roaring |= RoaringBitmap::deserialize_from(bytes.as_ref())?;
}
}
if roaring.is_empty() {
vec.sort_unstable();
vec.dedup();
if vec.len() <= THRESHOLD {
for integer in vec {
buffer.extend_from_slice(&integer.to_ne_bytes());
}
} else {
let roaring = RoaringBitmap::from_sorted_iter(vec.into_iter());
roaring.serialize_into(buffer)?;
}
} else {
roaring.extend(vec);
roaring.serialize_into(buffer)?;
}
Ok(())
}
}
impl heed::BytesDecode<'_> for CboRoaringBitmapCodec {
@ -106,4 +146,40 @@ mod tests {
assert!(roaring_size > bo_size);
}
#[test]
fn merge_cbo_roaring_bitmaps() {
let mut buffer = Vec::new();
let small_data = vec![
RoaringBitmap::from_sorted_iter(1..4),
RoaringBitmap::from_sorted_iter(2..5),
RoaringBitmap::from_sorted_iter(4..6),
RoaringBitmap::from_sorted_iter(1..3),
];
let small_data: Vec<_> =
small_data.iter().map(|b| CboRoaringBitmapCodec::bytes_encode(b).unwrap()).collect();
CboRoaringBitmapCodec::merge_into(small_data.as_slice(), &mut buffer).unwrap();
let bitmap = CboRoaringBitmapCodec::deserialize_from(&buffer).unwrap();
let expected = RoaringBitmap::from_sorted_iter(1..6);
assert_eq!(bitmap, expected);
let medium_data = vec![
RoaringBitmap::from_sorted_iter(1..4),
RoaringBitmap::from_sorted_iter(2..5),
RoaringBitmap::from_sorted_iter(4..8),
RoaringBitmap::from_sorted_iter(0..3),
RoaringBitmap::from_sorted_iter(7..23),
];
let medium_data: Vec<_> =
medium_data.iter().map(|b| CboRoaringBitmapCodec::bytes_encode(b).unwrap()).collect();
buffer.clear();
CboRoaringBitmapCodec::merge_into(medium_data.as_slice(), &mut buffer).unwrap();
let bitmap = CboRoaringBitmapCodec::deserialize_from(&buffer).unwrap();
let expected = RoaringBitmap::from_sorted_iter(0..23);
assert_eq!(bitmap, expected);
}
}