2021-09-28 22:58:48 +02:00
|
|
|
use std::io::{self, Read, Result as IoResult, Seek, Write};
|
|
|
|
use std::fmt;
|
2021-09-28 11:59:55 +02:00
|
|
|
|
2021-09-28 22:58:48 +02:00
|
|
|
use csv::{Reader as CsvReader, StringRecordsIntoIter};
|
2021-09-28 11:59:55 +02:00
|
|
|
use milli::documents::DocumentBatchBuilder;
|
|
|
|
use serde_json::{Deserializer, Map, Value};
|
|
|
|
|
|
|
|
type Result<T> = std::result::Result<T, DocumentFormatError>;
|
|
|
|
|
|
|
|
#[derive(Debug)]
|
|
|
|
pub enum PayloadType {
|
|
|
|
Jsonl,
|
2021-09-28 20:13:26 +02:00
|
|
|
Json,
|
2021-09-28 22:58:48 +02:00
|
|
|
Csv,
|
2021-09-28 11:59:55 +02:00
|
|
|
}
|
|
|
|
|
|
|
|
impl fmt::Display for PayloadType {
|
|
|
|
fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
|
|
|
|
match self {
|
|
|
|
PayloadType::Jsonl => write!(f, "ndjson"),
|
2021-09-28 20:13:26 +02:00
|
|
|
PayloadType::Json => write!(f, "json"),
|
2021-09-28 22:58:48 +02:00
|
|
|
PayloadType::Csv => write!(f, "csv"),
|
2021-09-28 11:59:55 +02:00
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
#[derive(thiserror::Error, Debug)]
|
|
|
|
pub enum DocumentFormatError {
|
|
|
|
#[error("Internal error: {0}")]
|
|
|
|
Internal(Box<dyn std::error::Error + Send + Sync + 'static>),
|
|
|
|
#[error("{0}. The {1} payload provided is malformed.")]
|
2021-09-28 22:22:59 +02:00
|
|
|
MalformedPayload(
|
|
|
|
Box<dyn std::error::Error + Send + Sync + 'static>,
|
|
|
|
PayloadType,
|
|
|
|
),
|
2021-09-28 11:59:55 +02:00
|
|
|
}
|
|
|
|
|
2021-09-28 22:58:48 +02:00
|
|
|
internal_error!(DocumentFormatError: milli::documents::Error, io::Error);
|
2021-09-28 11:59:55 +02:00
|
|
|
|
|
|
|
macro_rules! malformed {
|
|
|
|
($type:path, $e:expr) => {
|
|
|
|
$e.map_err(|e| DocumentFormatError::MalformedPayload(Box::new(e), $type))
|
|
|
|
};
|
|
|
|
}
|
|
|
|
|
2021-09-28 22:58:48 +02:00
|
|
|
pub fn read_csv(input: impl Read, writer: impl Write + Seek) -> Result<()> {
|
|
|
|
let mut builder = DocumentBatchBuilder::new(writer).unwrap();
|
|
|
|
|
|
|
|
let iter = CsvDocumentIter::from_reader(input)?;
|
|
|
|
for doc in iter {
|
|
|
|
let doc = doc?;
|
|
|
|
builder.add_documents(doc).unwrap();
|
|
|
|
}
|
|
|
|
builder.finish().unwrap();
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
|
|
|
|
2021-09-28 11:59:55 +02:00
|
|
|
/// read jsonl from input and write an obkv batch to writer.
|
|
|
|
pub fn read_jsonl(input: impl Read, writer: impl Write + Seek) -> Result<()> {
|
|
|
|
let mut builder = DocumentBatchBuilder::new(writer)?;
|
|
|
|
let stream = Deserializer::from_reader(input).into_iter::<Map<String, Value>>();
|
|
|
|
|
|
|
|
for value in stream {
|
|
|
|
let value = malformed!(PayloadType::Jsonl, value)?;
|
|
|
|
builder.add_documents(&value)?;
|
|
|
|
}
|
|
|
|
|
|
|
|
builder.finish()?;
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
2021-09-28 20:13:26 +02:00
|
|
|
|
|
|
|
/// read json from input and write an obkv batch to writer.
|
|
|
|
pub fn read_json(input: impl Read, writer: impl Write + Seek) -> Result<()> {
|
|
|
|
let mut builder = DocumentBatchBuilder::new(writer).unwrap();
|
|
|
|
|
2021-09-28 22:22:59 +02:00
|
|
|
let documents: Vec<Map<String, Value>> =
|
|
|
|
malformed!(PayloadType::Json, serde_json::from_reader(input))?;
|
2021-09-28 20:13:26 +02:00
|
|
|
builder.add_documents(documents).unwrap();
|
|
|
|
builder.finish().unwrap();
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
2021-09-28 22:58:48 +02:00
|
|
|
|
|
|
|
|
|
|
|
enum AllowedType {
|
|
|
|
String,
|
|
|
|
Number,
|
|
|
|
}
|
|
|
|
|
|
|
|
fn parse_csv_header(header: &str) -> (String, AllowedType) {
|
|
|
|
// if there are several separators we only split on the last one.
|
|
|
|
match header.rsplit_once(':') {
|
|
|
|
Some((field_name, field_type)) => match field_type {
|
|
|
|
"string" => (field_name.to_string(), AllowedType::String),
|
|
|
|
"number" => (field_name.to_string(), AllowedType::Number),
|
|
|
|
// if the pattern isn't reconized, we keep the whole field.
|
|
|
|
_otherwise => (header.to_string(), AllowedType::String),
|
|
|
|
},
|
|
|
|
None => (header.to_string(), AllowedType::String),
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
pub struct CsvDocumentIter<R>
|
|
|
|
where
|
|
|
|
R: Read,
|
|
|
|
{
|
|
|
|
documents: StringRecordsIntoIter<R>,
|
|
|
|
headers: Vec<(String, AllowedType)>,
|
|
|
|
}
|
|
|
|
|
|
|
|
impl<R: Read> CsvDocumentIter<R> {
|
|
|
|
pub fn from_reader(reader: R) -> IoResult<Self> {
|
|
|
|
let mut records = CsvReader::from_reader(reader);
|
|
|
|
|
|
|
|
let headers = records
|
|
|
|
.headers()?
|
|
|
|
.into_iter()
|
|
|
|
.map(parse_csv_header)
|
|
|
|
.collect();
|
|
|
|
|
|
|
|
Ok(Self {
|
|
|
|
documents: records.into_records(),
|
|
|
|
headers,
|
|
|
|
})
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
impl<R: Read> Iterator for CsvDocumentIter<R> {
|
|
|
|
type Item = Result<Map<String, Value>>;
|
|
|
|
|
|
|
|
fn next(&mut self) -> Option<Self::Item> {
|
|
|
|
let csv_document = self.documents.next()?;
|
|
|
|
|
|
|
|
match csv_document {
|
|
|
|
Ok(csv_document) => {
|
|
|
|
let mut document = Map::new();
|
|
|
|
|
|
|
|
for ((field_name, field_type), value) in
|
|
|
|
self.headers.iter().zip(csv_document.into_iter())
|
|
|
|
{
|
|
|
|
let parsed_value = (|| match field_type {
|
|
|
|
AllowedType::Number => malformed!(PayloadType::Csv, value
|
|
|
|
.parse::<f64>()
|
|
|
|
.map(Value::from)),
|
|
|
|
AllowedType::String => Ok(Value::String(value.to_string())),
|
|
|
|
})();
|
|
|
|
|
|
|
|
match parsed_value {
|
|
|
|
Ok(value) => drop(document.insert(field_name.to_string(), value)),
|
|
|
|
Err(e) => return Some(Err(e)),
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
Some(Ok(document))
|
|
|
|
}
|
|
|
|
Err(e) => Some(Err(DocumentFormatError::MalformedPayload(Box::new(e), PayloadType::Csv))),
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
#[cfg(test)]
|
|
|
|
mod test {
|
|
|
|
use serde_json::json;
|
|
|
|
|
|
|
|
use super::*;
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn simple_csv_document() {
|
|
|
|
let documents = r#"city,country,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city": "Boston",
|
|
|
|
"country": "United States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn coma_in_field() {
|
|
|
|
let documents = r#"city,country,pop
|
|
|
|
"Boston","United, States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city": "Boston",
|
|
|
|
"country": "United, States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn quote_in_field() {
|
|
|
|
let documents = r#"city,country,pop
|
|
|
|
"Boston","United"" States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city": "Boston",
|
|
|
|
"country": "United\" States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn integer_in_field() {
|
|
|
|
let documents = r#"city,country,pop:number
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city": "Boston",
|
|
|
|
"country": "United States",
|
|
|
|
"pop": 4628910.0,
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn float_in_field() {
|
|
|
|
let documents = r#"city,country,pop:number
|
|
|
|
"Boston","United States","4628910.01""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city": "Boston",
|
|
|
|
"country": "United States",
|
|
|
|
"pop": 4628910.01,
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn several_colon_in_header() {
|
|
|
|
let documents = r#"city:love:string,country:state,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city:love": "Boston",
|
|
|
|
"country:state": "United States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn ending_by_colon_in_header() {
|
|
|
|
let documents = r#"city:,country,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city:": "Boston",
|
|
|
|
"country": "United States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn starting_by_colon_in_header() {
|
|
|
|
let documents = r#":city,country,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
":city": "Boston",
|
|
|
|
"country": "United States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[ignore]
|
|
|
|
#[test]
|
|
|
|
fn starting_by_colon_in_header2() {
|
|
|
|
let documents = r#":string,country,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert!(dbg!(csv_iter.next().unwrap()).is_err());
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn double_colon_in_header() {
|
|
|
|
let documents = r#"city::string,country,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert_eq!(
|
|
|
|
Value::Object(csv_iter.next().unwrap().unwrap()),
|
|
|
|
json!({
|
|
|
|
"city:": "Boston",
|
|
|
|
"country": "United States",
|
|
|
|
"pop": "4628910",
|
|
|
|
})
|
|
|
|
);
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn bad_type_in_header() {
|
|
|
|
let documents = r#"city,country:number,pop
|
|
|
|
"Boston","United States","4628910""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert!(csv_iter.next().unwrap().is_err());
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn bad_column_count1() {
|
|
|
|
let documents = r#"city,country,pop
|
|
|
|
"Boston","United States","4628910", "too much""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert!(csv_iter.next().unwrap().is_err());
|
|
|
|
}
|
|
|
|
|
|
|
|
#[test]
|
|
|
|
fn bad_column_count2() {
|
|
|
|
let documents = r#"city,country,pop
|
|
|
|
"Boston","United States""#;
|
|
|
|
|
|
|
|
let mut csv_iter = CsvDocumentIter::from_reader(documents.as_bytes()).unwrap();
|
|
|
|
|
|
|
|
assert!(csv_iter.next().unwrap().is_err());
|
|
|
|
}
|
|
|
|
}
|