2021-08-16 13:36:30 +02:00
|
|
|
use std::borrow::Cow;
|
|
|
|
use std::fs::File;
|
|
|
|
use std::io::{self, Seek, SeekFrom};
|
|
|
|
use std::time::Instant;
|
|
|
|
|
|
|
|
use grenad::{CompressionType, MergerIter, Reader, Sorter};
|
|
|
|
use heed::types::ByteSlice;
|
|
|
|
use log::debug;
|
|
|
|
|
|
|
|
use super::{ClonableMmap, MergeFn};
|
|
|
|
use crate::error::InternalError;
|
|
|
|
use crate::Result;
|
|
|
|
|
|
|
|
pub type CursorClonableMmap = io::Cursor<ClonableMmap>;
|
|
|
|
|
|
|
|
pub fn create_writer<R: io::Write>(
|
|
|
|
typ: grenad::CompressionType,
|
|
|
|
level: Option<u32>,
|
|
|
|
file: R,
|
2022-02-16 15:28:48 +01:00
|
|
|
) -> grenad::Writer<R> {
|
2021-08-16 13:36:30 +02:00
|
|
|
let mut builder = grenad::Writer::builder();
|
|
|
|
builder.compression_type(typ);
|
|
|
|
if let Some(level) = level {
|
|
|
|
builder.compression_level(level);
|
|
|
|
}
|
|
|
|
builder.build(file)
|
|
|
|
}
|
|
|
|
|
|
|
|
pub fn create_sorter(
|
|
|
|
merge: MergeFn,
|
|
|
|
chunk_compression_type: grenad::CompressionType,
|
|
|
|
chunk_compression_level: Option<u32>,
|
|
|
|
max_nb_chunks: Option<usize>,
|
|
|
|
max_memory: Option<usize>,
|
|
|
|
) -> grenad::Sorter<MergeFn> {
|
|
|
|
let mut builder = grenad::Sorter::builder(merge);
|
|
|
|
builder.chunk_compression_type(chunk_compression_type);
|
|
|
|
if let Some(level) = chunk_compression_level {
|
|
|
|
builder.chunk_compression_level(level);
|
|
|
|
}
|
|
|
|
if let Some(nb_chunks) = max_nb_chunks {
|
|
|
|
builder.max_nb_chunks(nb_chunks);
|
|
|
|
}
|
|
|
|
if let Some(memory) = max_memory {
|
|
|
|
builder.dump_threshold(memory);
|
|
|
|
builder.allow_realloc(false);
|
|
|
|
}
|
|
|
|
builder.build()
|
|
|
|
}
|
|
|
|
|
|
|
|
pub fn sorter_into_reader(
|
|
|
|
sorter: grenad::Sorter<MergeFn>,
|
|
|
|
indexer: GrenadParameters,
|
|
|
|
) -> Result<grenad::Reader<File>> {
|
2022-02-16 15:28:48 +01:00
|
|
|
let mut writer = create_writer(
|
|
|
|
indexer.chunk_compression_type,
|
|
|
|
indexer.chunk_compression_level,
|
|
|
|
tempfile::tempfile()?,
|
|
|
|
);
|
|
|
|
sorter.write_into_stream_writer(&mut writer)?;
|
|
|
|
|
2021-08-16 13:36:30 +02:00
|
|
|
Ok(writer_into_reader(writer)?)
|
|
|
|
}
|
|
|
|
|
|
|
|
pub fn writer_into_reader(writer: grenad::Writer<File>) -> Result<grenad::Reader<File>> {
|
|
|
|
let mut file = writer.into_inner()?;
|
|
|
|
file.seek(SeekFrom::Start(0))?;
|
|
|
|
grenad::Reader::new(file).map_err(Into::into)
|
|
|
|
}
|
|
|
|
|
2022-02-16 15:40:08 +01:00
|
|
|
pub unsafe fn as_cloneable_grenad(
|
|
|
|
reader: &grenad::Reader<File>,
|
2021-08-16 13:36:30 +02:00
|
|
|
) -> Result<grenad::Reader<CursorClonableMmap>> {
|
2022-02-16 15:40:08 +01:00
|
|
|
let file = reader.get_ref();
|
|
|
|
let mmap = memmap2::Mmap::map(file)?;
|
2021-08-16 13:36:30 +02:00
|
|
|
let cursor = io::Cursor::new(ClonableMmap::from(mmap));
|
|
|
|
let reader = grenad::Reader::new(cursor)?;
|
|
|
|
Ok(reader)
|
|
|
|
}
|
|
|
|
|
2022-02-16 15:28:48 +01:00
|
|
|
pub fn merge_readers<R: io::Read + io::Seek>(
|
2021-08-16 13:36:30 +02:00
|
|
|
readers: Vec<grenad::Reader<R>>,
|
|
|
|
merge_fn: MergeFn,
|
|
|
|
indexer: GrenadParameters,
|
|
|
|
) -> Result<grenad::Reader<File>> {
|
|
|
|
let mut merger_builder = grenad::MergerBuilder::new(merge_fn);
|
2022-02-16 15:28:48 +01:00
|
|
|
for reader in readers {
|
|
|
|
merger_builder.push(reader.into_cursor()?);
|
|
|
|
}
|
|
|
|
|
2021-08-16 13:36:30 +02:00
|
|
|
let merger = merger_builder.build();
|
2022-02-16 15:28:48 +01:00
|
|
|
let mut writer = create_writer(
|
|
|
|
indexer.chunk_compression_type,
|
|
|
|
indexer.chunk_compression_level,
|
|
|
|
tempfile::tempfile()?,
|
|
|
|
);
|
|
|
|
merger.write_into_stream_writer(&mut writer)?;
|
|
|
|
|
|
|
|
Ok(writer_into_reader(writer)?)
|
2021-08-16 13:36:30 +02:00
|
|
|
}
|
|
|
|
|
|
|
|
#[derive(Debug, Clone, Copy)]
|
|
|
|
pub struct GrenadParameters {
|
|
|
|
pub chunk_compression_type: CompressionType,
|
|
|
|
pub chunk_compression_level: Option<u32>,
|
|
|
|
pub max_memory: Option<usize>,
|
|
|
|
pub max_nb_chunks: Option<usize>,
|
|
|
|
}
|
|
|
|
|
|
|
|
impl Default for GrenadParameters {
|
|
|
|
fn default() -> Self {
|
|
|
|
Self {
|
|
|
|
chunk_compression_type: CompressionType::None,
|
|
|
|
chunk_compression_level: None,
|
|
|
|
max_memory: None,
|
|
|
|
max_nb_chunks: None,
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
impl GrenadParameters {
|
2021-09-02 15:17:52 +02:00
|
|
|
/// This function use the number of threads in the current threadpool to compute the value.
|
|
|
|
/// This should be called inside of a rayon thread pool,
|
|
|
|
/// Otherwise, it will take the global number of threads.
|
2021-08-16 13:36:30 +02:00
|
|
|
pub fn max_memory_by_thread(&self) -> Option<usize> {
|
|
|
|
self.max_memory.map(|max_memory| max_memory / rayon::current_num_threads())
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
/// Returns an iterator that outputs grenad readers of obkv documents
|
|
|
|
/// with a maximum size of approximately `documents_chunks_size`.
|
|
|
|
///
|
|
|
|
/// The grenad obkv entries are composed of an incremental document id big-endian
|
|
|
|
/// encoded as the key and an obkv object with an `u8` for the field as the key
|
|
|
|
/// and a simple UTF-8 encoded string as the value.
|
2022-02-16 15:28:48 +01:00
|
|
|
pub fn grenad_obkv_into_chunks<R: io::Read + io::Seek>(
|
|
|
|
reader: grenad::Reader<R>,
|
2021-08-16 13:36:30 +02:00
|
|
|
indexer: GrenadParameters,
|
2021-09-02 15:17:52 +02:00
|
|
|
documents_chunk_size: usize,
|
2021-08-16 13:36:30 +02:00
|
|
|
) -> Result<impl Iterator<Item = Result<grenad::Reader<File>>>> {
|
|
|
|
let mut continue_reading = true;
|
2022-02-16 15:28:48 +01:00
|
|
|
let mut cursor = reader.into_cursor()?;
|
2021-08-16 13:36:30 +02:00
|
|
|
|
|
|
|
let indexer_clone = indexer.clone();
|
|
|
|
let mut transposer = move || {
|
|
|
|
if !continue_reading {
|
|
|
|
return Ok(None);
|
|
|
|
}
|
|
|
|
|
|
|
|
let mut current_chunk_size = 0u64;
|
2022-02-16 15:28:48 +01:00
|
|
|
let mut obkv_documents = create_writer(
|
|
|
|
indexer_clone.chunk_compression_type,
|
|
|
|
indexer_clone.chunk_compression_level,
|
|
|
|
tempfile::tempfile()?,
|
|
|
|
);
|
|
|
|
|
|
|
|
while let Some((document_id, obkv)) = cursor.move_on_next()? {
|
2021-08-16 13:36:30 +02:00
|
|
|
obkv_documents.insert(document_id, obkv)?;
|
|
|
|
current_chunk_size += document_id.len() as u64 + obkv.len() as u64;
|
|
|
|
|
2021-09-02 15:17:52 +02:00
|
|
|
if current_chunk_size >= documents_chunk_size as u64 {
|
2021-08-16 13:36:30 +02:00
|
|
|
return writer_into_reader(obkv_documents).map(Some);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
continue_reading = false;
|
|
|
|
writer_into_reader(obkv_documents).map(Some)
|
|
|
|
};
|
|
|
|
|
2021-09-02 16:57:46 +02:00
|
|
|
Ok(std::iter::from_fn(move || transposer().transpose()))
|
2021-08-16 13:36:30 +02:00
|
|
|
}
|
|
|
|
|
|
|
|
pub fn write_into_lmdb_database(
|
|
|
|
wtxn: &mut heed::RwTxn,
|
|
|
|
database: heed::PolyDatabase,
|
2022-02-16 15:28:48 +01:00
|
|
|
reader: Reader<File>,
|
2021-08-16 13:36:30 +02:00
|
|
|
merge: MergeFn,
|
|
|
|
) -> Result<()> {
|
|
|
|
debug!("Writing MTBL stores...");
|
|
|
|
let before = Instant::now();
|
|
|
|
|
2022-02-16 15:28:48 +01:00
|
|
|
let mut cursor = reader.into_cursor()?;
|
|
|
|
while let Some((k, v)) = cursor.move_on_next()? {
|
2022-01-25 17:12:12 +01:00
|
|
|
let mut iter = database.prefix_iter_mut::<_, ByteSlice, ByteSlice>(wtxn, k)?;
|
|
|
|
match iter.next().transpose()? {
|
|
|
|
Some((key, old_val)) if key == k => {
|
|
|
|
let vals = &[Cow::Borrowed(old_val), Cow::Borrowed(v)][..];
|
|
|
|
let val = merge(k, &vals)?;
|
2021-08-16 13:36:30 +02:00
|
|
|
// safety: we don't keep references from inside the LMDB database.
|
2022-01-25 17:12:12 +01:00
|
|
|
unsafe { iter.put_current(k, &val)? };
|
2021-08-16 13:36:30 +02:00
|
|
|
}
|
2022-01-25 17:12:12 +01:00
|
|
|
_ => {
|
|
|
|
drop(iter);
|
|
|
|
database.put::<_, ByteSlice, ByteSlice>(wtxn, k, v)?;
|
2021-08-16 13:36:30 +02:00
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
debug!("MTBL stores merged in {:.02?}!", before.elapsed());
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
|
|
|
pub fn sorter_into_lmdb_database(
|
|
|
|
wtxn: &mut heed::RwTxn,
|
|
|
|
database: heed::PolyDatabase,
|
|
|
|
sorter: Sorter<MergeFn>,
|
|
|
|
merge: MergeFn,
|
|
|
|
) -> Result<()> {
|
|
|
|
debug!("Writing MTBL sorter...");
|
|
|
|
let before = Instant::now();
|
|
|
|
|
2022-02-16 15:28:48 +01:00
|
|
|
merger_iter_into_lmdb_database(wtxn, database, sorter.into_stream_merger_iter()?, merge)?;
|
2021-08-16 13:36:30 +02:00
|
|
|
|
|
|
|
debug!("MTBL sorter writen in {:.02?}!", before.elapsed());
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
2022-02-16 15:28:48 +01:00
|
|
|
fn merger_iter_into_lmdb_database<R: io::Read + io::Seek>(
|
2021-08-16 13:36:30 +02:00
|
|
|
wtxn: &mut heed::RwTxn,
|
|
|
|
database: heed::PolyDatabase,
|
2022-02-16 15:28:48 +01:00
|
|
|
mut merger_iter: MergerIter<R, MergeFn>,
|
2021-08-16 13:36:30 +02:00
|
|
|
merge: MergeFn,
|
|
|
|
) -> Result<()> {
|
2022-02-16 15:28:48 +01:00
|
|
|
while let Some((k, v)) = merger_iter.next()? {
|
2022-01-25 17:12:12 +01:00
|
|
|
let mut iter = database.prefix_iter_mut::<_, ByteSlice, ByteSlice>(wtxn, k)?;
|
|
|
|
match iter.next().transpose()? {
|
|
|
|
Some((key, old_val)) if key == k => {
|
|
|
|
let vals = vec![Cow::Borrowed(old_val), Cow::Borrowed(v)];
|
|
|
|
let val = merge(k, &vals).map_err(|_| {
|
|
|
|
// TODO just wrap this error?
|
|
|
|
InternalError::IndexingMergingKeys { process: "get-put-merge" }
|
|
|
|
})?;
|
2021-08-16 13:36:30 +02:00
|
|
|
// safety: we don't keep references from inside the LMDB database.
|
2022-01-25 17:12:12 +01:00
|
|
|
unsafe { iter.put_current(k, &val)? };
|
2021-08-16 13:36:30 +02:00
|
|
|
}
|
2022-01-25 17:12:12 +01:00
|
|
|
_ => {
|
|
|
|
drop(iter);
|
|
|
|
database.put::<_, ByteSlice, ByteSlice>(wtxn, k, v)?;
|
2021-08-16 13:36:30 +02:00
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|