52 lines
1.2 KiB
Bash
52 lines
1.2 KiB
Bash
# Copyright 2021 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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PYTHON_COMPAT=( python3_{8..9} )
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# 3.10 missing on numba and spyking-circus
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inherit distutils-r1
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DESCRIPTION="Create NWB files by converting proprietary formats and adding essential metadata"
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HOMEPAGE="https://github.com/catalystneuro/nwb-conversion-tools"
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SRC_URI="https://github.com/catalystneuro/nwb-conversion-tools/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64"
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IUSE="test"
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#RESTRICT="test"
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RDEPEND="
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dev-python/h5py[${PYTHON_USEDEP}]
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dev-python/jsonschema[${PYTHON_USEDEP}]
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dev-python/lxml[${PYTHON_USEDEP}]
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dev-python/natsort[${PYTHON_USEDEP}]
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dev-python/neo[${PYTHON_USEDEP}]
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/pandas[${PYTHON_USEDEP}]
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dev-python/psutil[${PYTHON_USEDEP}]
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dev-python/pynwb[${PYTHON_USEDEP}]
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dev-python/pyyaml[${PYTHON_USEDEP}]
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dev-python/scipy[${PYTHON_USEDEP}]
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dev-python/spikeextractors[${PYTHON_USEDEP}]
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dev-python/tqdm[${PYTHON_USEDEP}]
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"
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# also needs:
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# spikesorters
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# spiketoolkit
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# neo == 0.9.0, actually
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# roiextractors
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DEPEND="
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test? (
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${RDEPEND}
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)
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"
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BDEPEND=""
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PATCHES=(
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"${FILESDIR}/${PN}-0.9.3-no-git-versioncheck.patch"
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)
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distutils_enable_tests pytest
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