Ebuild drafts
This commit is contained in:
Horea Christian
parent
ca5f02d066
commit
454f5dad02
|
|
@ -0,0 +1,56 @@
|
|||
# Copyright 1999-2018 Gentoo Foundation
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=7
|
||||
|
||||
PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
|
||||
PYTHON_REQ_USE="threads(+),sqlite"
|
||||
|
||||
inherit distutils-r1
|
||||
|
||||
DESCRIPTION="Neuroimaging in Python: Pipelines and Interfaces"
|
||||
HOMEPAGE="http://nipy.sourceforge.net/nipype/"
|
||||
SRC_URI="https://github.com/nipy/nipype/archive/${PV}.tar.gz -> ${P}.tar.gz"
|
||||
|
||||
LICENSE="BSD"
|
||||
SLOT="0"
|
||||
KEYWORDS="~amd64 ~x86"
|
||||
IUSE="test"
|
||||
|
||||
DEPEND="
|
||||
dev-python/future[${PYTHON_USEDEP}]
|
||||
dev-python/numpy[${PYTHON_USEDEP}]
|
||||
~dev-python/prov-1.5.0[${PYTHON_USEDEP}]
|
||||
dev-python/setuptools[${PYTHON_USEDEP}]
|
||||
sci-libs/nibabel[${PYTHON_USEDEP}]
|
||||
test? (
|
||||
dev-python/mock[${PYTHON_USEDEP}]
|
||||
dev-python/pytest[${PYTHON_USEDEP}]
|
||||
dev-python/pytest-cov[${PYTHON_USEDEP}]
|
||||
dev-python/pytest-xdist[${PYTHON_USEDEP}]
|
||||
${RDEPEND}
|
||||
)
|
||||
$(python_gen_cond_dep 'dev-python/configparser[${PYTHON_USEDEP}]' python2_7)
|
||||
"
|
||||
RDEPEND="
|
||||
>=dev-python/click-6.6[${PYTHON_USEDEP}]
|
||||
dev-python/networkx[${PYTHON_USEDEP}]
|
||||
dev-python/packaging[${PYTHON_USEDEP}]
|
||||
dev-python/pydot[${PYTHON_USEDEP}]
|
||||
dev-python/pydotplus[${PYTHON_USEDEP}]
|
||||
dev-python/pygraphviz[${PYTHON_USEDEP}]
|
||||
dev-python/python-dateutil[${PYTHON_USEDEP}]
|
||||
dev-python/simplejson[${PYTHON_USEDEP}]
|
||||
dev-python/traits[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
virtual/python-funcsigs[${PYTHON_USEDEP}]
|
||||
"
|
||||
|
||||
python_test() {
|
||||
py.test -v --cov nipype\
|
||||
--cov-config .coveragerc\
|
||||
--cov-report xml:cov.xml\
|
||||
-c nipype/pytest.ini\
|
||||
--doctest-modules nipype\
|
||||
|| die
|
||||
}
|
||||
|
|
@ -0,0 +1,57 @@
|
|||
# Copyright 1999-2019 Gentoo Authors
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=7
|
||||
|
||||
PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
|
||||
PYTHON_REQ_USE="threads(+),sqlite"
|
||||
|
||||
inherit distutils-r1
|
||||
|
||||
DESCRIPTION="Neuroimaging in Python: Pipelines and Interfaces"
|
||||
HOMEPAGE="http://nipy.sourceforge.net/nipype/"
|
||||
SRC_URI="https://github.com/nipy/nipype/archive/${PV}.tar.gz -> ${P}.tar.gz"
|
||||
|
||||
LICENSE="BSD"
|
||||
SLOT="0"
|
||||
KEYWORDS="~amd64 ~x86"
|
||||
IUSE="test"
|
||||
|
||||
DEPEND="
|
||||
dev-python/future[${PYTHON_USEDEP}]
|
||||
dev-python/numpy[${PYTHON_USEDEP}]
|
||||
~dev-python/prov-1.5.0[${PYTHON_USEDEP}]
|
||||
dev-python/setuptools[${PYTHON_USEDEP}]
|
||||
sci-libs/nibabel[${PYTHON_USEDEP}]
|
||||
test? (
|
||||
dev-python/mock[${PYTHON_USEDEP}]
|
||||
dev-python/pytest[${PYTHON_USEDEP}]
|
||||
dev-python/pytest-xdist[${PYTHON_USEDEP}]
|
||||
${RDEPEND}
|
||||
)
|
||||
$(python_gen_cond_dep '
|
||||
dev-python/futures[${PYTHON_USEDEP}]
|
||||
dev-python/configparser[${PYTHON_USEDEP}]' python2_7)
|
||||
"
|
||||
RDEPEND="
|
||||
>=dev-python/click-6.6[${PYTHON_USEDEP}]
|
||||
dev-python/networkx[${PYTHON_USEDEP}]
|
||||
dev-python/packaging[${PYTHON_USEDEP}]
|
||||
dev-python/pydot[${PYTHON_USEDEP}]
|
||||
dev-python/pydotplus[${PYTHON_USEDEP}]
|
||||
dev-python/pygraphviz[${PYTHON_USEDEP}]
|
||||
dev-python/python-dateutil[${PYTHON_USEDEP}]
|
||||
dev-python/simplejson[${PYTHON_USEDEP}]
|
||||
dev-python/traits[${PYTHON_USEDEP}]
|
||||
sci-libs/scipy[${PYTHON_USEDEP}]
|
||||
virtual/python-funcsigs[${PYTHON_USEDEP}]
|
||||
"
|
||||
|
||||
python_test() {
|
||||
py.test -v --cov nipype\
|
||||
--cov-config .coveragerc\
|
||||
--cov-report xml:cov.xml\
|
||||
-c nipype/pytest.ini\
|
||||
--doctest-modules nipype\
|
||||
|| die
|
||||
}
|
||||
|
|
@ -0,0 +1,28 @@
|
|||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
|
||||
<pkgmetadata>
|
||||
<maintainer type="person">
|
||||
<email>horea.christ@gmail.com</email>
|
||||
<name>Horea Christian</name>
|
||||
</maintainer>
|
||||
<maintainer type="project">
|
||||
<email>sci@gentoo.org</email>
|
||||
<name>Gentoo Science Project</name>
|
||||
</maintainer>
|
||||
<longdescription lang="en">
|
||||
Nipype, an open-source, community-developed initiative under the
|
||||
umbrella of NiPy, is a Python project that provides a uniform interface
|
||||
to existing neuroimaging software and facilitates interaction between
|
||||
these packages within a single workflow. Nipype provides an environment
|
||||
that encourages interactive exploration of algorithms from different
|
||||
packages (e.g., SPM, FSL, FreeSurfer, Camino, MRtrix, MNE, AFNI, Slicer),
|
||||
eases the design of workflows within and between packages, and reduces
|
||||
the learning curve necessary to use different packages. Nipype is
|
||||
creating a collaborative platform for neuroimaging software development
|
||||
in a high-level language and addressing limitations of existing pipeline systems.
|
||||
</longdescription>
|
||||
<upstream>
|
||||
<remote-id type="github">nipy/nipype</remote-id>
|
||||
<remote-id type="sourceforge">nipy</remote-id>
|
||||
</upstream>
|
||||
</pkgmetadata>
|
||||
Loading…
Reference in New Issue