Browse Source
git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@16 32389bae-6d03-0410-99cf-db05cde120ebambertools
tulku
17 years ago
5 changed files with 383 additions and 0 deletions
@ -0,0 +1,263 @@
|
||||
# ChangeLog for dev-lang/R |
||||
# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2 |
||||
# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/ChangeLog,v 1.61 2005/09/03 19:24:43 corsair Exp $ |
||||
|
||||
*R-2.2.0_p20051103 (10 Nov 2005) |
||||
|
||||
10 Nov 2005; Lucas Chiesa <lucas.chiesa@gmail.com> R-2.2.0_p20051103: |
||||
Added new ebuild for R-2.2.0 with the latest patch set (2005-11-03). |
||||
Thanks Fernando Henrique Ferraz Pereira da Rosa <mentus@gmx.de> |
||||
for the ebuild. Closes bug #112022. |
||||
|
||||
03 Sep 2005; Markus Rothe <corsair@gentoo.org> R-2.1.1.ebuild: |
||||
Stable on ppc64 |
||||
|
||||
02 Sep 2005; Michael Hanselmann <hansmi@gentoo.org> R-2.1.1.ebuild: |
||||
Stable on ppc. |
||||
|
||||
22 Aug 2005; Gustavo Zacarias <gustavoz@gentoo.org> R-2.1.1.ebuild: |
||||
Stable on sparc |
||||
|
||||
22 Aug 2005; Marcus D. Hanwell <cryos@gentoo.org> -R-2.0.1.ebuild, |
||||
R-2.1.1.ebuild: |
||||
Removed old version. Stable on amd64 and x86. |
||||
|
||||
*R-2.1.1 (01 Jul 2005) |
||||
|
||||
01 Jul 2005; Danny van Dyk <kugelfang@gentoo.org> R-2.0.1.ebuild, |
||||
R-2.1.0-r1.ebuild, +R-2.1.1.ebuild: |
||||
Moved 64bit check to pkg_setup() to make fortran.eclass work again. Bumped |
||||
to version 2.1.1 |
||||
|
||||
18 Jun 2005; Markus Rothe <corsair@gentoo.org> R-2.1.0-r1.ebuild: |
||||
Stable on ppc64 |
||||
|
||||
17 Jun 2005; Michael Hanselmann <hansmi@gentoo.org> R-2.1.0-r1.ebuild: |
||||
Stable on ppc. |
||||
|
||||
13 Jun 2005; Gustavo Zacarias <gustavoz@gentoo.org> R-2.1.0-r1.ebuild: |
||||
Stable on sparc |
||||
|
||||
12 Jun 2005; Marcus D. Hanwell <cryos@gentoo.org> -R-1.9.0-r1.ebuild: |
||||
Removing old version. Closes bug 91512. |
||||
|
||||
11 Jun 2005; Marcus D. Hanwell <cryos@gentoo.org> R-2.1.0-r1.ebuild: |
||||
Stable on amd64 and x86. |
||||
|
||||
07 Jun 2005; Patrick Kursawe <phosphan@gentoo.org> R-2.0.1.ebuild, |
||||
R-2.1.0-r1.ebuild: |
||||
Added LDPATH to R libs, bug #90601 |
||||
|
||||
01 Jun 2005; Mike Frysinger <vapier@gentoo.org> R-1.9.0-r1.ebuild, |
||||
R-2.0.1.ebuild: |
||||
Change USE=bzlib to USE=bzip2. |
||||
|
||||
*R-1.9.0-r1 (25 May 2005) |
||||
|
||||
25 May 2005; Marcus D. Hanwell <cryos@gentoo.org> +R-1.9.0-r1.ebuild: |
||||
Bring back R-1.9.0-r1 until <=dev-python/rpy-0.3.5-r1 are removed from |
||||
portage. |
||||
|
||||
25 May 2005; Marcus D. Hanwell <cryos@gentoo.org> -R-1.9.0-r1.ebuild: |
||||
Removed old version. |
||||
|
||||
25 May 2005; Luca Barbato <lu_zero@gentoo.org> R-2.0.1.ebuild: |
||||
Marked ppc |
||||
|
||||
24 May 2005; Marcus D. Hanwell <cryos@gentoo.org> R-2.0.1.ebuild: |
||||
Updated 64 bit detection code. |
||||
|
||||
10 May 2005; Gustavo Zacarias <gustavoz@gentoo.org> R-2.0.1.ebuild: |
||||
Stable on sparc |
||||
|
||||
08 May 2005; Marcus D. Hanwell <cryos@gentoo.org> -R-1.9.1.ebuild, |
||||
-R-2.0.0.ebuild, R-2.0.1.ebuild, -R-2.1.0.ebuild, R-2.1.0-r1.ebuild: |
||||
Marked 2.0.1 stable on amd64 and x86, cleaned out old ebuilds. Added new 64 |
||||
bit detection code to 2.1.0-r1 as per bug 91512. |
||||
|
||||
*R-2.1.0-r1 (29 Apr 2005) |
||||
|
||||
29 Apr 2005; Marcus D. Hanwell <cryos@gentoo.org> +R-2.1.0-r1.ebuild: |
||||
Get rid of obsolete USE flags, tidy up deps a little. Thanks to MATSUU |
||||
Takuto <matsuu@gentoo.org> in bug 67834 for the patch. |
||||
|
||||
21 Apr 2005; Marcus D. Hanwell <cryos@gentoo.org> R-2.1.0.ebuild: |
||||
Update deps to reflect new USE flags. |
||||
|
||||
*R-2.1.0 (20 Apr 2005) |
||||
|
||||
20 Apr 2005; Marcus D. Hanwell <cryos@gentoo.org> +R-2.1.0.ebuild: |
||||
Version bump, ebuild cleanups and some additional USE flags. Thanks to |
||||
matsuu for some of the suggestions in bug 67834. |
||||
|
||||
*R-2.0.1 (21 Feb 2005) |
||||
|
||||
21 Feb 2005; Danny van Dyk <kugelfang@gentoo.org> R-2.0.0.ebuild, |
||||
+R-2.0.1.ebuild: |
||||
Fixed a sandbox violation in R-2.0.0 (BUG #79004) and marked stabled on |
||||
amd64. Added R-2.0.1 (BUG #72313). |
||||
|
||||
17 Feb 2005; Bryan Østergaard <kloeri@gentoo.org> R-1.9.1.ebuild: |
||||
~alpha keyword. |
||||
|
||||
02 Feb 2005; Danny van Dyk <kugelfang@gentoo.org> R-2.0.0.ebuild: |
||||
GNU Fortran 77 profile name changed to g77 in fortran.eclass |
||||
|
||||
17 Nov 2004; Markus Rothe <corsair@gentoo.org> R-2.0.0.ebuild: |
||||
stable on ppc64 |
||||
|
||||
10 Oct 2004; Danny van Dyk <kugelfang@gentoo.org> -R-1.8.1.ebuild, |
||||
R-1.9.0-r1.ebuild, R-2.0.0.ebuild: |
||||
R-2.0.0 now in testing on x86,sparc,amd64,ppc and ppc64; using new |
||||
fortran.eclass. R-1.9.0-r1 stable on all arches. Removed obsolete R-1.8.1. |
||||
|
||||
*R-2.0.0 (07 Oct 2004) |
||||
|
||||
07 Oct 2004; George Shapovalov <george@gentoo.org> R-2.0.0 : |
||||
new version, masked with KEYWORDS="-*" to get a bit more testing |
||||
|
||||
30 Sep 2004; Ferris McCormick <fmccor@gentoo.org> R-1.9.0-r1.ebuild: |
||||
Stable for sparc. |
||||
|
||||
12 Sep 2004; Danny van Dyk <kugelfang@gentoo.org> R-1.9.0-r1.ebuild, |
||||
R-1.9.1.ebuild: |
||||
Removed f2c support for dev-lang/R on 64-bit arches. This is entirely R's |
||||
fault. f2c works perfectly right. Future versions of dev-lang/R will check for |
||||
this in ./configure. For R-1.9.{0,1} the ebuild checks for it. Fixes BUG |
||||
#61042. |
||||
|
||||
*R-1.9.1 (22 Aug 2004) |
||||
|
||||
09 Sep 2004; Philippe Trottier <tchiwam@gentoo.org> R-1.9.1.ebuild, |
||||
marked ~ppc64 |
||||
|
||||
22 Aug 2004; Danny van Dyk <kugelfang@gentoo.org> -R-1.9.0.ebuild, |
||||
+R-1.9.1.ebuild: |
||||
Version bump to 1.9.1 (current stable). Removed obsolete 1.9.0. |
||||
|
||||
06 Aug 2004; Danny van Dyk <kugelfang@gentoo.org> R-1.9.0-r1.ebuild: |
||||
Marked stable on amd64. |
||||
|
||||
11 Jul 2004; Danny van Dyk <kugelfang@gentoo.org> R-1.8.1.ebuild, |
||||
R-1.9.0-r1.ebuild, R-1.9.0.ebuild: |
||||
Fixed BUG #56616. Tidied up g77/f2c check in >=R-1.9.0. Added f2c USE flag. |
||||
|
||||
01 Jul 2004; Jeremy Huddleston <eradicator@gentoo.org> R-1.8.1.ebuild, |
||||
R-1.9.0-r1.ebuild, R-1.9.0.ebuild: |
||||
virtual/glibc -> virtual/libc |
||||
|
||||
01 Jul 2004; Danny van Dyk <kugelfang@gentoo.org> R-1.8.1.ebuild, |
||||
R-1.9.0-r1.ebuild, R-1.9.0.ebuild: |
||||
Fixed BUG #55386 for amd64. Pending for rest of arches. |
||||
|
||||
*R-1.9.0-r1 (05 Jun 2004) |
||||
|
||||
05 Jun 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.9.0-r1.ebuild: |
||||
Added a few USE flags according to suggestions by Leo Chen <lcheu@cs.sfu.ca> |
||||
|
||||
28 May 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.9.0.ebuild: |
||||
Removing the f77 USE flag check - just giving a hint when no g77 found. |
||||
|
||||
17 May 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.9.0.ebuild: |
||||
adding f77 to IUSE |
||||
|
||||
11 May 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.9.0.ebuild: |
||||
pkg_setup checks for g77 presence now. |
||||
|
||||
20 Apr 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.9.0.ebuild: |
||||
Changed dependency - works also with current libglade, see bug #47825 |
||||
|
||||
*R-1.9.0 (13 Apr 2004) |
||||
|
||||
13 Apr 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.8.1.ebuild, |
||||
R-1.9.0.ebuild: |
||||
Version bump, added write permission for /var/cache/fonts |
||||
|
||||
01 Apr 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.8.0.ebuild, |
||||
R-1.8.1.ebuild: |
||||
1.8.1 is stable |
||||
|
||||
22 Mar 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.8.1.ebuild: |
||||
Fixing bug #40100 (problems with newer Xfree) |
||||
|
||||
25 Feb 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.4.1-r1.ebuild, |
||||
R-1.4.1.ebuild, R-1.5.1.ebuild, R-1.6.1.ebuild, R-1.6.2.ebuild, |
||||
R-1.7.0.ebuild, R-1.7.1.ebuild, R-1.8.0.ebuild, files/R-1.5.1-tcltk.diff: |
||||
Big cleanup, marking 1.8.0 as stable |
||||
|
||||
*R-1.8.1 (17 Feb 2004) |
||||
|
||||
17 Feb 2004; Patrick Kursawe <phosphan@gentoo.org> R-1.8.1.ebuild: |
||||
Version bump |
||||
|
||||
21 Oct 2003; David Holm <dholm@gentoo.org> R-1.8.0.ebuild: |
||||
Added to ~ppc. |
||||
|
||||
*R-1.8.0 (16 Oct 2003) |
||||
|
||||
16 Oct 2003; George Shapovalov <george@gentoo.org> R-1.8.0 : |
||||
new version (#30784), fixes gnome? dependencies |
||||
thanks to kdh <bolter111@hotmail.com> for an update |
||||
|
||||
*R-1.7.1 (19 Jun 2003) |
||||
|
||||
19 Jun 2003; George Shapovalov <george@gentoo.org> R-1.7.1 : |
||||
new version (#23012), now correctly builds tcltk support |
||||
fix and update by Tristan Henderson <T.Henderson@cs.ucl.ac.uk> |
||||
|
||||
*R-1.7.0 (29 May 2003) |
||||
|
||||
29 May 2003; Grant Goodyear <g2boojum@gentoo.org> R-1.7.0.ebuild: |
||||
Version update. Thanks to Stuart Luppescu for the heads-up. |
||||
|
||||
*R-1.6.2 (12 Apr 2003) |
||||
|
||||
12 Apr 2003; Grant Goodyear <g2boojum@gentoo.org> Manifest, R-1.6.2.ebuild: |
||||
Version bump |
||||
|
||||
*R-1.6.1 (12 Dec 2002) |
||||
|
||||
12 Dec 2002; George Shapovalov <george@gentoo.org> R-1.6.1.ebuild : |
||||
|
||||
version update, patching is unnecessary now. |
||||
Update subitted by Sam Wouters <sam.wouters@esat.kuleuven.ac.be>, see #11313 |
||||
|
||||
* Autoupdate keywords (12-6-02) |
||||
06 Dec 2002; Rodney Rees <manson@gentoo.org> : changed sparc ~sparc keywords |
||||
|
||||
*R-1.5.1 (11 July 2002) |
||||
|
||||
09 Aug 2002; George Shapovalov <george@gentoo.org> R-1.5.1.ebuild : |
||||
|
||||
fixed the wrappers: |
||||
R installs two identical wrappers (R that invoke R.bin) under /usr/bin and |
||||
/usr/lib/R/bin/. Only one of these was modified to have correct R_HOME_DIR |
||||
Changed ebuild to modify R under /usr/lib/R/bin and symlink it into /usr/bin |
||||
|
||||
11 July 2002; George Shapovalov <george@gentoo.org> R-1.5.1.ebuild, files/digest-R-1.5.1 : |
||||
|
||||
upped version |
||||
new version submitted by Tristan Henderson <T.Henderson@cs.ucl.ac.uk> |
||||
|
||||
*R-1.4.1-r1 (11 Apr 2002) |
||||
11 Apr 2002; Spider <spider@gentoo.org> |
||||
Forcing an upgrade due to libpng upgrade. |
||||
|
||||
|
||||
*R-1.4.1 (19 Feb 2002) |
||||
|
||||
19 Feb 2002; T.Neidt <tod@gentoo.org> ChangeLog, R-1.4.1.ebuild : |
||||
|
||||
Initial commit. R is GNU S - A language and environment for statistical |
||||
computing and graphics. Gnome and tcltk gui's are available if in USE. |
||||
|
||||
If gnome, a rudimentary menu entry is made under Applications. |
||||
However, it has the annoying tendency to pop up a terminal window to start |
||||
the gui. (todo 1) |
||||
|
||||
Also, the html files are not accessible from the toolbar menu entry unless |
||||
you happen to be running netscape. (todo 2) |
||||
|
||||
This ebuild makes use of a new USE variable, 'atlas', which will compile |
||||
R using the auto-tuned blas libraries provided by atlas. NOTE: atlas ebuild |
||||
currently only provides static libraries. Shared libraries are in the works. |
||||
@ -0,0 +1,4 @@
|
||||
MD5 70940a38a384f0e3481f0830e1f00d38 R-2.2.0_p20051103.ebuild 3216 |
||||
MD5 207ddfb5f5a1df1a0a67e34cab4052cd ChangeLog 9369 |
||||
MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156 |
||||
MD5 1c4697b00564f08c0e7a17257fdd7f57 files/digest-R-2.2.0_p20051103 75 |
||||
@ -0,0 +1,110 @@
|
||||
# Copyright 1999-2005 Gentoo Foundation |
||||
# Distributed under the terms of the GNU General Public License v2 |
||||
# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/R-2.1.1.ebuild,v 1.5 2005/09/03 19:24:43 corsair Exp $ |
||||
|
||||
inherit fortran toolchain-funcs |
||||
|
||||
IUSE="blas jpeg nls png readline tcltk X" |
||||
DESCRIPTION="R is GNU S - A language and environment for statistical computing and graphics." |
||||
MY_P="R-patched" |
||||
SRC_URI="ftp://ftp.stat.math.ethz.ch/Software/R/${MY_P}_2005-11-09.tar.bz2" |
||||
#SRC_URI="http://cran.r-project.org/src/base/R-2/${P}.tar.gz" |
||||
#There are daily release patches, don't know how to utilize these |
||||
#"ftp://ftp.stat.math.ethz.ch/Software/${PN}/${PN}-release.diff.gz" |
||||
|
||||
HOMEPAGE="http://www.r-project.org/" |
||||
DEPEND="virtual/libc |
||||
>=dev-lang/perl-5.6.1-r3 |
||||
readline? ( >=sys-libs/readline-4.1-r3 ) |
||||
jpeg? ( >=media-libs/jpeg-6b-r2 ) |
||||
png? ( >=media-libs/libpng-1.2.1 ) |
||||
blas? ( virtual/blas ) |
||||
X? ( virtual/x11 ) |
||||
tcltk? ( dev-lang/tk )" |
||||
SLOT="0" |
||||
LICENSE="GPL-2 LGPL-2.1" |
||||
KEYWORDS="~x86" |
||||
|
||||
S=${WORKDIR}/${MY_P} |
||||
|
||||
pkg_setup() { |
||||
# Test for a 64 bit architecture - f2c won't work on 64 bit archs with R. |
||||
# Thanks to vapier for providing the test. |
||||
echo 'int main(){}' > test.c |
||||
$(tc-getCC) -c test.c -o test.o |
||||
if file test.o | grep -qs 64-bit ; then |
||||
einfo "64 bit architecture detected, using g77." |
||||
FORTRAN="g77" |
||||
else |
||||
FORTRAN="g77 f2c" |
||||
fi |
||||
fortran_pkg_setup |
||||
} |
||||
|
||||
src_compile() { |
||||
local myconf="--enable-R-profiling --enable-R-shlib --enable-linux-lfs" |
||||
|
||||
if use tcltk; then |
||||
#configure needs to find the files tclConfig.sh and tkConfig.sh |
||||
myconf="${myconf} --with-tcltk --with-tcl-config=/usr/lib/tclConfig.sh --with-tk-config=/usr/lib/tkConfig.sh" |
||||
else |
||||
myconf="${myconf} --without-tcltk" |
||||
fi |
||||
|
||||
econf \ |
||||
$(use_enable nls) \ |
||||
$(use_with blas) \ |
||||
$(use_with jpeg jpeglib) \ |
||||
$(use_with png libpng) \ |
||||
$(use_with readline) \ |
||||
$(use_with X x) \ |
||||
${myconf} || die "econf failed" |
||||
emake || die "emake failed" |
||||
} |
||||
|
||||
src_install() { |
||||
make \ |
||||
prefix=${D}/usr \ |
||||
mandir=${D}/usr/share/man \ |
||||
infodir=${D}/usr/share/info \ |
||||
rhome=${D}/usr/$(get_libdir)/R \ |
||||
install || die "Installation Failed" |
||||
|
||||
#fix the R wrapper script to have the correct R_HOME_DIR |
||||
#sed regexp borrowed from included debian rules |
||||
sed \ |
||||
-e "/^R_HOME_DIR=.*/s::R_HOME_DIR=/usr/$(get_libdir)/R:" \ |
||||
-i ${D}/usr/$(get_libdir)/R/bin/R \ |
||||
|| die "sed failed" |
||||
|
||||
#same for R_SHARE_DIR, R_INCLUDE_DIR and R_DOC_DIR |
||||
|
||||
sed \ |
||||
-e "/^R_SHARE_DIR=.*/s::R_SHARE_DIR=/usr/$(get_libdir)/R/share:" \ |
||||
-i ${D}/usr/$(get_libdir)/R/bin/R \ |
||||
|| die "sed failed" |
||||
|
||||
sed \ |
||||
-e "/^R_INCLUDE_DIR=.*/s::R_INCLUDE_DIR=/usr/$(get_libdir)/R/include:" \ |
||||
-i ${D}/usr/$(get_libdir)/R/bin/R \ |
||||
|| die "sed failed" |
||||
|
||||
sed \ |
||||
-e "/^R_DOC_DIR=.*/s::R_DOC_DIR=/usr/$(get_libdir)/R/doc:" \ |
||||
-i ${D}/usr/$(get_libdir)/R/bin/R \ |
||||
|| die "sed failed" |
||||
|
||||
|
||||
#R installs two identical wrappers under /usr/bin and /usr/lib/R/bin/ |
||||
#the 2nd one is corrected by above sed, for the 1st |
||||
#I'll just symlink it into /usr/bin |
||||
cd ${D}/usr/bin/ |
||||
rm R |
||||
dosym ../$(get_libdir)/R/bin/R /usr/bin/R |
||||
dodir /etc/env.d |
||||
echo > ${D}/etc/env.d/99R "LDPATH=/usr/$(get_libdir)/R/lib" |
||||
cd ${S} |
||||
|
||||
dodoc AUTHORS BUGS COPYING* ChangeLog FAQ *NEWS README \ |
||||
RESOURCES THANKS VERSION Y2K |
||||
} |
||||
@ -0,0 +1 @@
|
||||
MD5 2095c08f6ce15124b9f6e4333b20202e R-patched_2005-11-09.tar.bz2 11991521 |
||||
Loading…
Reference in new issue