3f9228690e
Package-Manager: Portage-2.3.78, Repoman-2.3.17 Signed-off-by: Horea Christian <chr@chymera.eu>
60 lines
1.5 KiB
Bash
60 lines
1.5 KiB
Bash
# Copyright 1999-2019 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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PYTHON_COMPAT=( python3_{5,6} )
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inherit distutils-r1 virtualx
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DESCRIPTION="The FSL Python Library"
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HOMEPAGE="https://git.fmrib.ox.ac.uk/fsl/fslpy"
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SRC_URI="https://github.com/pauldmccarthy/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="test"
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DEPEND="
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test? (
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dev-python/pytest[${PYTHON_USEDEP}]
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dev-python/pytest-cov[${PYTHON_USEDEP}]
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)
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dev-python/setuptools[${PYTHON_USEDEP}]
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"
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RDEPEND="
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dev-python/deprecation[${PYTHON_USEDEP}]
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dev-python/h5py[${PYTHON_USEDEP}]
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dev-python/indexed_gzip[${PYTHON_USEDEP}]
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=dev-python/numpy-1*[${PYTHON_USEDEP}]
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=dev-python/six-1*[${PYTHON_USEDEP}]
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dev-python/trimesh[${PYTHON_USEDEP}]
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=dev-python/wxpython-4*[${PYTHON_USEDEP}]
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=sci-libs/Rtree-0.8.3*[${PYTHON_USEDEP}]
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sci-libs/scipy[${PYTHON_USEDEP}]
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>=sci-libs/nibabel-2.3.1[${PYTHON_USEDEP}]
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"
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# Tests fail on Gentoo with mysterious `Fatal Python error: deallocating None`
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# https://github.com/pauldmccarthy/fslpy/issues/3
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#RESTRICT="test"
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#python_prepare_all() {
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# if use test; then
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# # Reported upstream
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# # https://github.com/pauldmccarthy/fslpy/issues/3
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# #sed -i -e \
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# # "/def test_loadVestLutFile():/i@pytest.mark.xfail(reason='Known to fail on Gentoo')" \
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# # tests/test_vest.py || die
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# #rm tests/test_vest.py
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# fi
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# distutils-r1_python_prepare_all
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#}
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PATCHES=( "${FILESDIR}/${P}-exclude_tests.patch" )
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python_test() {
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virtx pytest -m "not (dicomtest or fsltest)" --verbose || die
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}
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