68 lines
1.7 KiB
Bash
68 lines
1.7 KiB
Bash
# Copyright 2021 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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PYTHON_COMPAT=( python3_{8..10} )
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inherit distutils-r1
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DESCRIPTION="offline/online spike sorting"
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HOMEPAGE="https://github.com/tridesclous/tridesclous"
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SRC_URI="https://github.com/tridesclous/tridesclous/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
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LICENSE="MIT"
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SLOT="0"
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KEYWORDS="~amd64"
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IUSE="gui test"
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RESTRICT="test"
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# Tests fail, reported upstream
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# https://github.com/tridesclous/tridesclous/issues/175
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RDEPEND="
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dev-python/cython[${PYTHON_USEDEP}]
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dev-python/hdbscan[${PYTHON_USEDEP}]
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dev-python/loky[${PYTHON_USEDEP}]
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dev-python/matplotlib[${PYTHON_USEDEP}]
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dev-python/neo[${PYTHON_USEDEP}]
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dev-python/numba
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/openpyxl[${PYTHON_USEDEP}]
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dev-python/pandas[${PYTHON_USEDEP}]
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dev-python/scipy[${PYTHON_USEDEP}]
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dev-python/tqdm[${PYTHON_USEDEP}]
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sci-libs/scikit-learn[${PYTHON_USEDEP}]
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gui? (
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dev-python/PyQt5[${PYTHON_USEDEP}]
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)
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"
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# Technically also seaborn:
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# dev-python/seaborn[${PYTHON_USEDEP}]
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DEPEND="
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test? (
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${RDEPEND}
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)
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"
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distutils_enable_tests pytest
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python_test() {
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local EPYTEST_IGNORE=(
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tridesclous/online/tests/test_launcher.py
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tridesclous/online/tests/test_onlinepeeler.py
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tridesclous/online/tests/test_onlinewindow.py
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)
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if use !gui ; then
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EPYTEST_IGNORE+=(
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tridesclous/gui/test_gpuselector.py
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tridesclous/gui/icons/test_ressources.py
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tridesclous/gui/tests/test_cataloguewindow.py
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tridesclous/gui/tests/test_gui_tools.py
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tridesclous/gui/tests/test_initializedatasetwindow.py
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tridesclous/gui/tests/test_mainwindow.py
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tridesclous/gui/tests/test_peelerwindow.py
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tridesclous/gui/tests/test_probegeometryview.py
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)
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fi
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epytest
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}
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