71 lines
1.8 KiB
Bash
71 lines
1.8 KiB
Bash
# Copyright 2021-2023 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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PYTHON_COMPAT=( python3_{10..11} )
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# dev-python/hdf5storage is holding 3.10 back
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inherit distutils-r1
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DESCRIPTION="Extract, convert, and interface with extracellular data, now in spikeinterfaces"
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HOMEPAGE="https://github.com/SpikeInterface/spikeextractors"
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SRC_URI="https://github.com/SpikeInterface/spikeextractors/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
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LICENSE="MIT"
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SLOT="0"
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KEYWORDS="~amd64"
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# dev-python/hdf5storage, datalad, and neo hold back ~x86
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IUSE="test"
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RESTRICT="test"
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# Tests fail, but the package is deprecated, so no use checking with upstream.
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# We only distribute this because nwb-conversion-tools still uses it.
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RDEPEND="
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dev-python/h5py[${PYTHON_USEDEP}]
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dev-python/hdf5storage[${PYTHON_USEDEP}]
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dev-python/joblib[${PYTHON_USEDEP}]
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dev-python/loky[${PYTHON_USEDEP}]
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dev-python/lxml[${PYTHON_USEDEP}]
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dev-python/matplotlib[${PYTHON_USEDEP}]
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dev-python/neo[${PYTHON_USEDEP}]
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/pandas[${PYTHON_USEDEP}]
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dev-python/pynwb[${PYTHON_USEDEP}]
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dev-python/pyyaml[${PYTHON_USEDEP}]
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dev-python/scipy[${PYTHON_USEDEP}]
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dev-python/tqdm[${PYTHON_USEDEP}]
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dev-vcs/datalad
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"
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# also needs
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# pyintan
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# pyopenephys
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# nixio
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# shybird
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# mtscomp
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# exdir
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# sonpy
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# pyyaml and shybird might not really be needed
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DEPEND="
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test? (
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dev-python/parameterized[${PYTHON_USEDEP}]
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dev-python/tridesclous[${PYTHON_USEDEP}]
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dev-vcs/datalad
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${RDEPEND}
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)
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"
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BDEPEND=""
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PATCHES=(
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"${FILESDIR}/${PN}-0.9.7-no-test-install.patch"
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)
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distutils_enable_tests pytest
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src_install() {
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pwd
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ls -lah
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rm -rf tests/ || die "Could not remove tests directory incorrectly selected by package for install."
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ls -lah
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distutils-r1_src_install
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}
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