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TheChymera-overlay/sci-biology/ants/ants-2.3.1_p20191013.ebuild
Horea Christian 217dac5169
sci-biology/ants: prefix fix ahead of Gentoo Science
Package-Manager: Portage-2.3.78, Repoman-2.3.17
Signed-off-by: Horea Christian <chr@chymera.eu>
2019-12-14 11:28:21 +01:00

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# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
CMAKE_MAKEFILE_GENERATOR="emake"
inherit cmake-utils git-r3 multilib
DESCRIPTION="Advanced Normalitazion Tools for neuroimaging"
HOMEPAGE="http://stnava.github.io/ANTs/"
SRC_URI="
test? (
http://chymera.eu/distfiles/ants_testdata-${PV}.tar.xz
)
"
EGIT_REPO_URI="https://github.com/stnava/ANTs.git"
EGIT_COMMIT="f78b2d4a382d3090230641b5ade5da28962dad04"
SLOT="0"
LICENSE="BSD"
KEYWORDS="~amd64 ~x86"
IUSE="test vtk"
DEPEND="
vtk? (
~sci-libs/itk-5.0.1[vtkglue]
sci-libs/vtk
)
!vtk? ( ~sci-libs/itk-5.0.1 )
"
RDEPEND="${DEPEND}"
PATCHES=(
"${FILESDIR}/${P}-logic.patch"
"${FILESDIR}/${P}-paths.patch"
)
src_unpack() {
git-r3_src_unpack
if use test; then
mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory."
tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data."
fi
}
src_configure() {
local mycmakeargs=(
-DUSE_SYSTEM_ITK=ON
-DITK_DIR="${EROOT}/usr/include/ITK-5.0/"
-DBUILD_TESTING="$(usex test ON OFF)"
-DUSE_VTK=$(usex vtk ON OFF)
-DUSE_SYSTEM_VTK=$(usex vtk ON OFF)
)
use vtk && mycmakeargs+=(
-DVTK_DIR="${EROOT}/usr/include/vtk-8.1/"
)
use test && mycmakeargs+=(
-DExternalData_OBJECT_STORES="${S}/.ExternalData/MD5"
)
cmake-utils_src_configure
}
src_install() {
BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build"
cmake-utils_src_install
cd "${WORKDIR}/${P}/Scripts" || die "scripts dir not found"
dobin *.sh
dodir /usr/$(get_libdir)/ants
install -t "${D}"/"${EROOT%/}"/usr/$(get_libdir)/ants * || die
doenvd "${FILESDIR}"/99ants
}