# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7 #CMAKE_MAKEFILE_GENERATOR="emake" PYTHON_COMPAT=( python3_{8..10} ) inherit cmake distutils-r1 git-r3 multilib ninja-utils GTS_HASH="962155a01f5a1b87bd64e3e3d880b4dbc2347ac7" NIFTI_HASH="65f801b9c2f1f15f4de4a19d45e6595c25765632" GIFTI_HASH="5eae81ba1e87ef3553df3b6ba585f12dc81a0030" DESCRIPTION="Advanced Normalitazion Tools for neuroimaging" HOMEPAGE="http://stnava.github.io/ANTs/" SRC_URI=" https://github.com/leej3/gts/archive/${GTS_HASH}.tar.gz https://github.com/NIFTI-Imaging/nifti_clib/archive/${NIFTI_HASH}.tar.gz https://github.com/NIFTI-Imaging/gifti_clib/archive/${GIFTI_HASH}.tar.gz " EGIT_REPO_URI="https://github.com/leej3/afni.git" EGIT_BRANCH="make_some_build_fixes_for_gentoo_packaging" SLOT="0" LICENSE="GPL-3+" KEYWORDS="" IUSE="test" RESTRICT="!test? ( test )" RDEPEND=" dev-libs/glib:2 dev-libs/libf2c dev-libs/expat dev-util/ninja media-libs/freeglut media-libs/glu media-libs/netpbm media-libs/qhull media-video/mpeg-tools sci-libs/gsl sys-devel/llvm:* sys-libs/libomp dev-libs/libpthread-stubs virtual/jpeg-compat:62 x11-libs/libGLw x11-libs/libXft x11-libs/libXi x11-libs/libXmu x11-libs/libXpm x11-libs/libXt x11-libs/motif[-static-libs] " DEPEND=" ${RDEPEND} app-shells/tcsh " # Prospectively: #sci-libs/gts #Update jpeg-compat to virtual/jpeg:0 # look for xmhtlm src_prepare() { tar xf "${DISTDIR}/${GTS_HASH}.tar.gz" || die tar xf "${DISTDIR}/${NIFTI_HASH}.tar.gz" || die tar xf "${DISTDIR}/${GIFTI_HASH}.tar.gz" || die cmake_src_prepare default } src_configure() { #LDFLAGS="-L${S}/${LIBDIR} ${LDFLAGS}" econf --enable-progpath="${EPREFIX}/usr/bin" export CFLAGS="-pthread ${CFLAGS}" export GIT_REPO_VERSION=3.0.1.1 #export LDFLAGS="-lpthread ${LDFLAGS}" #-CC="$(tc-getCC)" local mycmakeargs=( -GNinja -DLIBDIR=/usr/$(get_libdir) -DNIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir) -DGIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir) -DAFNI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir) -DCMAKE_INSTALL_LIBDIR=/usr/$(get_libdir) -DCOMP_COREBINARIES=ON -DUSE_SYSTEM_NIFTI=OFF -DUSE_SYSTEM_GIFTI=OFF -DUSE_SYSTEM_XMHTML=OFF -DUSE_SYSTEM_GTS=OFF -DFETCHCONTENT_SOURCE_DIR_GTS="${WORKDIR}/${P}/gts-${GTS_HASH}" -DFETCHCONTENT_SOURCE_DIR_NIFTI_CLIB="${WORKDIR}/${P}/nifti_clib-${NIFTI_HASH}" -DFETCHCONTENT_SOURCE_DIR_GIFTI_CLIB="${WORKDIR}/${P}/gifti_clib-${GIFTI_HASH}" -DCOMP_GUI=ON -DCOMP_PLUGINS=ON -DUSE_OMP=ON -DCOMP_PYTHON=OFF -DPython_FIND_VIRTUALENV=STANDARD -DPython_FIND_STRATEGY=LOCATION ) tc-export CC cmake_src_configure } src_compile() { cd ../afni-9999_build pwd ls -la eninja || die } #/work/afni-9999/nifti_clib-65f801b9c2f1f15f4de4a19d45e6595c25765632 src_install() { cd ../afni-9999_build DESTDIR=${D} eninja install #BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build" #cmake_src_install #cd "${S}/Scripts" || die "scripts dir not found" #dobin *.sh #dodir /usr/$(get_libdir)/ants #insinto "/usr/$(get_libdir)/ants" #doins * #doenvd "${FILESDIR}"/99ants }