sci-biology/afni: Python support unfinished
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@ -1,7 +0,0 @@
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11 Jan 2021; <chymera@gentoo.org> afni-9999.ebuild:
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sci-biology/afni: no keywords for live ebuild
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*afni-9999 (09 Jan 2021)
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09 Jan 2021; <chymera@gentoo.org> +afni-9999.ebuild, +metadata.xml:
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sci-biology/afni: new ebuild for CMake install
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@ -4,9 +4,9 @@
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EAPI=7
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#CMAKE_MAKEFILE_GENERATOR="emake"
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PYTHON_COMPAT=( python3_{6..8} )
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PYTHON_COMPAT=( python3_{8..10} )
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inherit cmake distutils-r1 git-r3 multilib
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inherit cmake distutils-r1 git-r3 multilib ninja-utils
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GTS_HASH="962155a01f5a1b87bd64e3e3d880b4dbc2347ac7"
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NIFTI_HASH="65f801b9c2f1f15f4de4a19d45e6595c25765632"
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@ -19,7 +19,8 @@ SRC_URI="
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https://github.com/NIFTI-Imaging/nifti_clib/archive/${NIFTI_HASH}.tar.gz
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https://github.com/NIFTI-Imaging/gifti_clib/archive/${GIFTI_HASH}.tar.gz
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"
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EGIT_REPO_URI="https://github.com/afni/afni.git"
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EGIT_REPO_URI="https://github.com/leej3/afni.git"
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EGIT_BRANCH="make_some_build_fixes_for_gentoo_packaging"
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SLOT="0"
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LICENSE="GPL-3+"
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@ -70,11 +71,17 @@ src_prepare() {
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src_configure() {
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#LDFLAGS="-L${S}/${LIBDIR} ${LDFLAGS}" econf --enable-progpath="${EPREFIX}/usr/bin"
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export CFLAGS="-pthread ${CFLAGS}"
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export GIT_REPO_VERSION=3.0.1.1
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#export LDFLAGS="-lpthread ${LDFLAGS}"
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#-CC="$(tc-getCC)"
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local mycmakeargs=(
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-GNinja
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-DCOMP_BINARIES=ON
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-DLIBDIR=/usr/$(get_libdir)
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-DNIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
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-DGIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
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-DAFNI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
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-DCMAKE_INSTALL_LIBDIR=/usr/$(get_libdir)
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-DCOMP_COREBINARIES=ON
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-DUSE_SYSTEM_NIFTI=OFF
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-DUSE_SYSTEM_GIFTI=OFF
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-DUSE_SYSTEM_XMHTML=OFF
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@ -86,19 +93,31 @@ src_configure() {
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-DCOMP_PLUGINS=ON
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-DUSE_OMP=ON
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-DCOMP_PYTHON=OFF
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-DPython_FIND_VIRTUALENV=STANDARD
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-DPython_FIND_STRATEGY=LOCATION
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)
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tc-export CC
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cmake_src_configure
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}
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src_compile() {
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cd ../afni-9999_build
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pwd
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ls -la
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eninja || die
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}
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#/work/afni-9999/nifti_clib-65f801b9c2f1f15f4de4a19d45e6595c25765632
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#src_install() {
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# BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build"
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# cmake_src_install
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# cd "${S}/Scripts" || die "scripts dir not found"
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# dobin *.sh
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# dodir /usr/$(get_libdir)/ants
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# insinto "/usr/$(get_libdir)/ants"
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# doins *
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# doenvd "${FILESDIR}"/99ants
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#}
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src_install() {
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cd ../afni-9999_build
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DESTDIR=${D} eninja install
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#BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build"
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#cmake_src_install
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#cd "${S}/Scripts" || die "scripts dir not found"
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#dobin *.sh
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#dodir /usr/$(get_libdir)/ants
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#insinto "/usr/$(get_libdir)/ants"
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#doins *
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#doenvd "${FILESDIR}"/99ants
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}
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