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sci-biology/afni: Python support unfinished

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This commit is contained in:
Horea Christian 2021-09-30 05:54:18 -04:00
parent 7fb5150b64
commit e987d06dce
2 changed files with 33 additions and 21 deletions
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7
sci-biology/afni/ChangeLog
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@ -1,7 +0,0 @@
11 Jan 2021; <chymera@gentoo.org> afni-9999.ebuild:
sci-biology/afni: no keywords for live ebuild
*afni-9999 (09 Jan 2021)
09 Jan 2021; <chymera@gentoo.org> +afni-9999.ebuild, +metadata.xml:
sci-biology/afni: new ebuild for CMake install

47
sci-biology/afni/afni-9999.ebuild
View File

@ -4,9 +4,9 @@
EAPI=7 EAPI=7
#CMAKE_MAKEFILE_GENERATOR="emake" #CMAKE_MAKEFILE_GENERATOR="emake"
PYTHON_COMPAT=( python3_{6..8} ) PYTHON_COMPAT=( python3_{8..10} )
inherit cmake distutils-r1 git-r3 multilib inherit cmake distutils-r1 git-r3 multilib ninja-utils
GTS_HASH="962155a01f5a1b87bd64e3e3d880b4dbc2347ac7" GTS_HASH="962155a01f5a1b87bd64e3e3d880b4dbc2347ac7"
NIFTI_HASH="65f801b9c2f1f15f4de4a19d45e6595c25765632" NIFTI_HASH="65f801b9c2f1f15f4de4a19d45e6595c25765632"
@ -19,7 +19,8 @@ SRC_URI="
https://github.com/NIFTI-Imaging/nifti_clib/archive/${NIFTI_HASH}.tar.gz https://github.com/NIFTI-Imaging/nifti_clib/archive/${NIFTI_HASH}.tar.gz
https://github.com/NIFTI-Imaging/gifti_clib/archive/${GIFTI_HASH}.tar.gz https://github.com/NIFTI-Imaging/gifti_clib/archive/${GIFTI_HASH}.tar.gz
" "
EGIT_REPO_URI="https://github.com/afni/afni.git" EGIT_REPO_URI="https://github.com/leej3/afni.git"
EGIT_BRANCH="make_some_build_fixes_for_gentoo_packaging"
SLOT="0" SLOT="0"
LICENSE="GPL-3+" LICENSE="GPL-3+"
@ -70,11 +71,17 @@ src_prepare() {
src_configure() { src_configure() {
#LDFLAGS="-L${S}/${LIBDIR} ${LDFLAGS}" econf --enable-progpath="${EPREFIX}/usr/bin" #LDFLAGS="-L${S}/${LIBDIR} ${LDFLAGS}" econf --enable-progpath="${EPREFIX}/usr/bin"
export CFLAGS="-pthread ${CFLAGS}" export CFLAGS="-pthread ${CFLAGS}"
export GIT_REPO_VERSION=3.0.1.1
#export LDFLAGS="-lpthread ${LDFLAGS}" #export LDFLAGS="-lpthread ${LDFLAGS}"
#-CC="$(tc-getCC)" #-CC="$(tc-getCC)"
local mycmakeargs=( local mycmakeargs=(
-GNinja -GNinja
-DCOMP_BINARIES=ON -DLIBDIR=/usr/$(get_libdir)
-DNIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
-DGIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
-DAFNI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
-DCMAKE_INSTALL_LIBDIR=/usr/$(get_libdir)
-DCOMP_COREBINARIES=ON
-DUSE_SYSTEM_NIFTI=OFF -DUSE_SYSTEM_NIFTI=OFF
-DUSE_SYSTEM_GIFTI=OFF -DUSE_SYSTEM_GIFTI=OFF
-DUSE_SYSTEM_XMHTML=OFF -DUSE_SYSTEM_XMHTML=OFF
@ -86,19 +93,31 @@ src_configure() {
-DCOMP_PLUGINS=ON -DCOMP_PLUGINS=ON
-DUSE_OMP=ON -DUSE_OMP=ON
-DCOMP_PYTHON=OFF -DCOMP_PYTHON=OFF
-DPython_FIND_VIRTUALENV=STANDARD
-DPython_FIND_STRATEGY=LOCATION
) )
tc-export CC tc-export CC
cmake_src_configure cmake_src_configure
} }
src_compile() {
cd ../afni-9999_build
pwd
ls -la
eninja || die
}
#/work/afni-9999/nifti_clib-65f801b9c2f1f15f4de4a19d45e6595c25765632 #/work/afni-9999/nifti_clib-65f801b9c2f1f15f4de4a19d45e6595c25765632
#src_install() { src_install() {
# BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build" cd ../afni-9999_build
# cmake_src_install DESTDIR=${D} eninja install
# cd "${S}/Scripts" || die "scripts dir not found" #BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build"
# dobin *.sh #cmake_src_install
# dodir /usr/$(get_libdir)/ants #cd "${S}/Scripts" || die "scripts dir not found"
# insinto "/usr/$(get_libdir)/ants" #dobin *.sh
# doins * #dodir /usr/$(get_libdir)/ants
# doenvd "${FILESDIR}"/99ants #insinto "/usr/$(get_libdir)/ants"
#} #doins *
#doenvd "${FILESDIR}"/99ants
}