dev-python/tridesclous: version bump 1.6.6
Signed-off-by: Horea Christian <chr@chymera.eu>
This commit is contained in:
Horea Christian
parent
5b57da4392
commit
aecb747a50
|
|
@ -14,29 +14,25 @@ LICENSE="MIT"
|
|||
SLOT="0"
|
||||
KEYWORDS="~amd64"
|
||||
IUSE="gui test"
|
||||
#RESTRICT="test"
|
||||
# Tests fail, reported upstream
|
||||
# https://github.com/tridesclous/tridesclous/issues/175
|
||||
|
||||
RDEPEND="
|
||||
<dev-python/numpy-1.24.0[${PYTHON_USEDEP}]
|
||||
dev-python/cython[${PYTHON_USEDEP}]
|
||||
dev-python/hdbscan[${PYTHON_USEDEP}]
|
||||
dev-python/loky[${PYTHON_USEDEP}]
|
||||
dev-python/matplotlib[${PYTHON_USEDEP}]
|
||||
dev-python/neo[${PYTHON_USEDEP}]
|
||||
dev-python/numba
|
||||
<dev-python/numpy-1.24.0[${PYTHON_USEDEP}]
|
||||
dev-python/openpyxl[${PYTHON_USEDEP}]
|
||||
dev-python/pandas[${PYTHON_USEDEP}]
|
||||
dev-python/scipy[${PYTHON_USEDEP}]
|
||||
dev-python/seaborn[${PYTHON_USEDEP}]
|
||||
dev-python/tqdm[${PYTHON_USEDEP}]
|
||||
sci-libs/scikit-learn[${PYTHON_USEDEP}]
|
||||
gui? (
|
||||
dev-python/PyQt5[${PYTHON_USEDEP}]
|
||||
)
|
||||
"
|
||||
# Technically also seaborn:
|
||||
# dev-python/seaborn[${PYTHON_USEDEP}]
|
||||
DEPEND="
|
||||
test? (
|
||||
${RDEPEND}
|
||||
|
|
@ -45,22 +41,64 @@ DEPEND="
|
|||
|
||||
distutils_enable_tests pytest
|
||||
|
||||
# Network sandboxing, this is sadly more than half the test suite :(
|
||||
EPYTEST_DESELECT=(
|
||||
tridesclous/tests/test_cleancluster.py::test_auto_split
|
||||
tridesclous/tests/test_cleancluster.py::test_trash_not_aligned
|
||||
tridesclous/tests/test_cleancluster.py::test_auto_merge
|
||||
tridesclous/tests/test_cleancluster.py::test_trash_low_extremum
|
||||
tridesclous/tests/test_cleancluster.py::test_trash_small_cluster
|
||||
tridesclous/tests/test_cluster.py::test_sawchaincut
|
||||
tridesclous/tests/test_cluster.py::test_pruningshears
|
||||
tridesclous/tests/test_decomposition.py::test_all_decomposition
|
||||
tridesclous/tests/test_export.py::test_export
|
||||
tridesclous/tests/test_export.py::test_export_catalogue_spikes
|
||||
tridesclous/tests/test_jobtools.py::test_run_parallel_signalprocessor
|
||||
tridesclous/tests/test_matplotlibplot.py::test_plot_probe_geometry
|
||||
tridesclous/tests/test_matplotlibplot.py::test_plot_signals
|
||||
tridesclous/tests/test_matplotlibplot.py::test_plot_waveforms_with_geometry
|
||||
tridesclous/tests/test_matplotlibplot.py::test_plot_waveforms
|
||||
tridesclous/tests/test_matplotlibplot.py::test_plot_features_scatter_2d
|
||||
tridesclous/tests/test_metrics.py::test_all_metrics
|
||||
tridesclous/tests/test_metrics.py::test_cluster_ratio
|
||||
tridesclous/tests/test_peeler.py::test_peeler_geometry
|
||||
tridesclous/tests/test_peeler.py::test_peeler_geometry_cl
|
||||
tridesclous/tests/test_peeler.py::test_peeler_empty_catalogue
|
||||
tridesclous/tests/test_peeler.py::test_peeler_several_chunksize
|
||||
tridesclous/tests/test_peeler.py::test_peeler_with_and_without_preprocessor
|
||||
tridesclous/tests/test_peeler.py::test_export_spikes
|
||||
tridesclous/tests/test_report.py::test_summary_catalogue_clusters
|
||||
tridesclous/tests/test_report.py::test_summary_noise
|
||||
tridesclous/tests/test_report.py::test_summary_after_peeler_clusters
|
||||
tridesclous/tests/test_report.py::test_generate_report
|
||||
tridesclous/tests/test_autoparams.py::test_get_auto_params
|
||||
tridesclous/tests/test_catalogueconstructor.py::test_catalogue_constructor
|
||||
tridesclous/tests/test_catalogueconstructor.py::test_make_catalogue
|
||||
tridesclous/tests/test_catalogueconstructor.py::test_ratio_amplitude
|
||||
tridesclous/tests/test_catalogueconstructor.py::test_create_savepoint_catalogue_constructor
|
||||
tridesclous/tests/test_catalogueconstructor.py::test_feature_with_lda_selection
|
||||
tridesclous/tests/test_cataloguetools.py::test_apply_all_catalogue_steps
|
||||
tridesclous/tests/test_dataio.py::test_DataIO
|
||||
tridesclous/tests/test_dataio.py::test_DataIO_probes
|
||||
tridesclous/tests/test_datasets.py::test_download_dataset
|
||||
tridesclous/tests/test_datasets.py::test_get_dataset
|
||||
tridesclous/tests/test_datasource.py::test_RawDataSource
|
||||
tridesclous/tests/test_datasource.py::test_NeoRawIOAggregator
|
||||
tridesclous/tests/test_peakdetector.py::test_compare_offline_online_engines
|
||||
tridesclous/tests/test_peakdetector.py::test_detect_geometrical_peaks
|
||||
tridesclous/tests/test_peakdetector.py::test_peak_sign_symetry
|
||||
tridesclous/tests/test_signalpreprocessor.py::test_compare_offline_online_engines
|
||||
tridesclous/tests/test_signalpreprocessor.py::test_auto_pad_width
|
||||
tridesclous/tests/test_tools.py::test_fix_prb_file_py2
|
||||
)
|
||||
|
||||
python_test() {
|
||||
local EPYTEST_IGNORE=(
|
||||
tridesclous/online/tests/test_launcher.py
|
||||
tridesclous/online/tests/test_onlinepeeler.py
|
||||
tridesclous/online/tests/test_onlinewindow.py
|
||||
tridesclous/online/tests/*
|
||||
)
|
||||
if use !gui ; then
|
||||
EPYTEST_IGNORE+=(
|
||||
tridesclous/gui/test_gpuselector.py
|
||||
tridesclous/gui/icons/test_ressources.py
|
||||
tridesclous/gui/tests/test_cataloguewindow.py
|
||||
tridesclous/gui/tests/test_gui_tools.py
|
||||
tridesclous/gui/tests/test_initializedatasetwindow.py
|
||||
tridesclous/gui/tests/test_mainwindow.py
|
||||
tridesclous/gui/tests/test_peelerwindow.py
|
||||
tridesclous/gui/tests/test_probegeometryview.py
|
||||
local EPYTEST_IGNORE+=(
|
||||
tridesclous/gui/*
|
||||
)
|
||||
fi
|
||||
epytest
|
||||
|
|
|
|||
Loading…
Reference in New Issue