gentoo-related/TheChymera-overlay
gentoo-related/TheChymera-overlay
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Merge branch 'master' of github.com:TheChymera/overlay

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Horea Christian 2019-11-10 21:11:00 +01:00
commit 9efd871cbb
3 changed files with 51 additions and 1 deletions
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5
sci-libs/scikits_learn/ChangeLog
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@ -1,3 +1,8 @@
10 Nov 2019; <chymera@gentoo.org>
+files/scikits_learn-0.20.3-cblas-enum.patch, scikits_learn-0.20.3.ebuild:
sci-libs/scikits_learn: fixed CBLAS API usage
https://bugs.gentoo.org/630294#c23
*scikits_learn-0.20.3 (16 Jun 2019) *scikits_learn-0.20.3 (16 Jun 2019)
16 Jun 2019; <chymera@gentoo.org> 16 Jun 2019; <chymera@gentoo.org>

42
sci-libs/scikits_learn/files/scikits_learn-0.20.3-cblas-enum.patch Normal file
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@ -0,0 +1,42 @@
--- scikit-learn-0.20.3.orig/sklearn/linear_model/cd_fast.c 2019-08-09 03:05:05.351926119 +0500
+++ scikit-learn-0.20.3/sklearn/linear_model/cd_fast.c 2019-08-09 03:05:35.022926006 +0500
@@ -4889,7 +4889,7 @@
static PyObject *__pyx_pf_7sklearn_12linear_model_7cd_fast_8enet_coordinate_descent(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_w, float __pyx_v_alpha, float __pyx_v_beta, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_y, int __pyx_v_max_iter, float __pyx_v_tol, PyObject *__pyx_v_rng, int __pyx_v_random, int __pyx_v_positive) {
PyObject *__pyx_v_dtype = NULL;
- void (*__pyx_v_gemv)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, float, float *, int, float *, int, float, float *, int);
+ void (*__pyx_v_gemv)(CBLAS_ORDER, CBLAS_TRANSPOSE, int, int, float, float *, int, float *, int, float, float *, int);
float (*__pyx_v_dot)(int, float *, int, float *, int);
void (*__pyx_v_axpy)(int, float, float *, int, float *, int);
float (*__pyx_v_asum)(int, float *, int);
@@ -6279,7 +6279,7 @@
static PyObject *__pyx_pf_7sklearn_12linear_model_7cd_fast_10enet_coordinate_descent(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_w, double __pyx_v_alpha, double __pyx_v_beta, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_y, int __pyx_v_max_iter, double __pyx_v_tol, PyObject *__pyx_v_rng, int __pyx_v_random, int __pyx_v_positive) {
PyObject *__pyx_v_dtype = NULL;
- void (*__pyx_v_gemv)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, double, double *, int, double *, int, double, double *, int);
+ void (*__pyx_v_gemv)(CBLAS_ORDER, CBLAS_TRANSPOSE, int, int, double, double *, int, double *, int, double, double *, int);
double (*__pyx_v_dot)(int, double *, int, double *, int);
void (*__pyx_v_axpy)(int, double, double *, int, double *, int);
double (*__pyx_v_asum)(int, double *, int);
@@ -16246,8 +16246,8 @@
CYTHON_UNUSED float (*__pyx_v_asum)(int, float *, int);
void (*__pyx_v_copy)(int, float *, int, float *, int);
void (*__pyx_v_scal)(int, float, float *, int);
- void (*__pyx_v_ger)(enum CBLAS_ORDER, int, int, float, float *, int, float *, int, float *, int);
- void (*__pyx_v_gemv)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, float, float *, int, float *, int, float, float *, int);
+ void (*__pyx_v_ger)(CBLAS_ORDER, int, int, float, float *, int, float *, int, float *, int);
+ void (*__pyx_v_gemv)(CBLAS_ORDER, CBLAS_TRANSPOSE, int, int, float, float *, int, float *, int, float, float *, int);
unsigned int __pyx_v_n_samples;
unsigned int __pyx_v_n_features;
unsigned int __pyx_v_n_tasks;
@@ -17965,8 +17965,8 @@
CYTHON_UNUSED double (*__pyx_v_asum)(int, double *, int);
void (*__pyx_v_copy)(int, double *, int, double *, int);
void (*__pyx_v_scal)(int, double, double *, int);
- void (*__pyx_v_ger)(enum CBLAS_ORDER, int, int, double, double *, int, double *, int, double *, int);
- void (*__pyx_v_gemv)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, double, double *, int, double *, int, double, double *, int);
+ void (*__pyx_v_ger)(CBLAS_ORDER, int, int, double, double *, int, double *, int, double *, int);
+ void (*__pyx_v_gemv)(CBLAS_ORDER, CBLAS_TRANSPOSE, int, int, double, double *, int, double *, int, double, double *, int);
unsigned int __pyx_v_n_samples;
unsigned int __pyx_v_n_features;
unsigned int __pyx_v_n_tasks;

5
sci-libs/scikits_learn/scikits_learn-0.20.3.ebuild
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@ -43,7 +43,10 @@ DEPEND="
S="${WORKDIR}/${MYP}" S="${WORKDIR}/${MYP}"
PATCHES=( "${FILESDIR}"/${PN}-0.18.1-system-cblas.patch ) PATCHES=(
"${FILESDIR}"/${PN}-0.18.1-system-cblas.patch
"${FILESDIR}"/${P}-cblas-enum.patch
)
python_prepare_all() { python_prepare_all() {
# bug #397605 # bug #397605