Migrated to Gentoo Science
https://gitweb.gentoo.org/proj/sci.git/commit/?id=b78267d25570586f0a6dfd7d8d948c974c4e2846
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Horea Christian
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aac3519c37
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DIST pypubsub-3.4.0.tar.gz 169245 SHA256 641f03213491de9acd23ce69573fac7a03141c7eedd22d8cd62a70a564629000 SHA512 539e10ddd767a592487a318ec202051a9546a489ccb13cfe9f8016ce129b6428eee5e4fd191cdd513feb9d01886a60823ca1fd05cf96748d90fd2d0fb69b3e3a WHIRLPOOL 758edee90229f8a2ed2b8f397950f99dcf943276e37572736805ffb693454cd4f4f7f0978b8cfa4a21cba79e0f8185c9537fcf2699ca318d785207b44bd25a8d
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DIST pypubsub-3.4.2.tar.gz 169226 SHA256 105b5779e836058d5deb788413f5a3a60958445d1795cf176b899a4dfbe9a0a7 SHA512 02b3b3e3bfd864606264dca8cb1730f6b2ef94552d888f777f1fc289ba5c39f87af584a7f44b50c34f15f9c89fd09c57c8ed78f2043981cf9e0f8af40d2b96b3 WHIRLPOOL 18c0689f31a063f5fe04f6efbbd718577d2cb0c54f55322fc12adcfdacda31ff394fe4455a1e1cc2584c662809d1199aa1a63a7fb84bb604a8639b13bc4a7a04
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DIST pypubsub-4.0.3.tar.gz 174033 SHA256 0df83daa1cb0021bab858ff6812d836c9712dea59a5172be1888bb554c3a89a2 SHA512 cf9aca44e91a5d0e5ecf6739deabf2980f9464395c89e3c5335c5248e47c570701e0534bb660c5005325a994d9f8e7f261f36bc8bea74cfc7eb760b73c572652 WHIRLPOOL 706ddf8e86c432f6b7ebbae5a74547b2d54bbae1a04dcf238c96cc90800c2e44c2d35bc14e0e5efa0eb2594a6a2b4167428d28fc9cc72c598eb3e5254e0f3fd3
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# Copyright 1999-2019 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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PYTHON_COMPAT=( python2_7 )
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inherit distutils-r1
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DESCRIPTION="A Python publish-subcribe library"
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HOMEPAGE="https://github.com/schollii/pypubsub/"
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SRC_URI="https://github.com/schollii/pypubsub/archive/v${PV}rc1.tar.gz -> ${P}.tar.gz"
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LICENSE="BSD"
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SLOT="3"
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KEYWORDS="~amd64 ~x86"
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IUSE="test"
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DEPEND="test? ( dev-python/pytest[${PYTHON_USEDEP}] )"
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RDEPEND="virtual/python-pathlib[${PYTHON_USEDEP}]"
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python_test() {
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distutils_install_for_testing
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cd "tests/suite" || die
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pytest -vv || die
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}
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S="${WORKDIR}/${PN}-${PV}rc1"
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29 Mar 2019; <chymera@gentoo.org>
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-files/0001-BUG-Wrap-TransformFileReader-TransformFileWriter.patch,
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-files/0002-COMP-Fixed-itkQuasiNewtonOptimizerv4-wrapping-warnin.patch,
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-files/0003-COMP-Fixed-itkGradientDescentOptimizerv4-wrapping-wa.patch,
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-files/0004-COMP-Warp-OptimizerParameterScalesEstimatorTemplate.patch,
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-files/0005-make-gdcm-helper-library-static.patch,
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-files/nrrdio-linking.patch, itk-5.0_rc1.ebuild, metadata.xml:
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sci-libs/itk: version bump 5.0 ahead of Gentoo Sci
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DIST v5.0rc01.tar.gz 20944543 SHA256 fa6cd61bc39ccdc53808b9b0df5dd95d63a3c08be130e63ab0f4b77ca9594e46 SHA512 30e327708c7717bb2131911c86802c4104730d146b4263c68ae89384d3f01a6675b3abf5962af14cc7f40984cb1e8eedd911fe0f084a8deb4c79b4239b309728 WHIRLPOOL 6447eccbb17573233f750e3462dadd4c44c177613ca88520787579cc6e10ac523488e44dbf0f3e690a0cc009443b5adccdf62b588bdf6180dbda4a98b7d03cef
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# Copyright 1999-2019 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
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inherit eutils toolchain-funcs cmake-utils python-single-r1
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MY_PV="5.0rc01"
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DESCRIPTION="NLM Insight Segmentation and Registration Toolkit"
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HOMEPAGE="http://www.itk.org"
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SRC_URI="https://github.com/InsightSoftwareConsortium/ITK/archive/v${MY_PV}.tar.gz"
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RESTRICT="primaryuri"
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LICENSE="Apache-2.0"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE="debug doc examples fftw python review test vtkglue"
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RDEPEND="
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dev-libs/double-conversion:0=
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media-libs/openjpeg:2
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media-libs/libpng:0=
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media-libs/tiff:0=
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sci-libs/dcmtk:0=
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sci-libs/hdf5:0=[cxx]
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sys-libs/zlib:0=
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virtual/jpeg:0=
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fftw? ( sci-libs/fftw:3.0= )
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vtkglue? ( sci-libs/vtk:0=[python?] )
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"
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DEPEND="${RDEPEND}
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python? (
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${PYTHON_DEPS}
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>=dev-lang/swig-2.0:0
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>=dev-cpp/gccxml-0.9.0_pre20120309
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)
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doc? ( app-doc/doxygen )
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"
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REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
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S="${WORKDIR}/ITK-${MY_PV}"
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pkg_pretend() {
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if [[ -z ${ITK_COMPUTER_MEMORY_SIZE} ]]; then
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elog "To tune ITK to make the best use of working memory you can set"
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elog " ITK_COMPUTER_MEMORY_SIZE=XX"
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elog "in make.conf, default is 1 (unit is GB)"
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fi
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if use python && [[ -z ${ITK_WRAP_DIMS} ]]; then
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elog "For Python language bindings, you can define the dimensions"
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elog "you want to create bindings for by setting"
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elog " ITK_WRAP_DIMS=X;Y;Z..."
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elog "in make.conf, default is 2;3 for 2D and 3D data"
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fi
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}
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src_prepare() {
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sed -i -e "s/find_package(OpenJPEG 2.0.0/find_package(OpenJPEG/g"\
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Modules/ThirdParty/GDCM/src/gdcm/CMakeLists.txt
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default
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}
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src_configure() {
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local mycmakeargs=(
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-DBUILD_SHARED_LIBS=ON
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-DITK_USE_SYSTEM_DCMTK=ON
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-DGDCM_USE_SYSTEM_OPENJPEG=ON
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-DITK_USE_SYSTEM_DOUBLECONVERSION=ON
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-DITK_USE_SYSTEM_CASTXML=ON
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-DITK_USE_SYSTEM_HDF5=ON
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-DITK_USE_SYSTEM_JPEG=ON
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-DITK_USE_SYSTEM_PNG=ON
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-DITK_USE_SYSTEM_SWIG=ON
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-DITK_USE_SYSTEM_TIFF=ON
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-DITK_USE_SYSTEM_ZLIB=ON
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-DITK_BUILD_DEFAULT_MODULES=ON
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-DITK_COMPUTER_MEMORY_SIZE="${ITK_COMPUTER_MEMORY_SIZE:-1}"
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-DWRAP_ITK_JAVA=OFF
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-DWRAP_ITK_TCL=OFF
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-Ddouble-conversion_INCLUDE_DIRS="${EPREFIX}/usr/include/double-conversion"
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-DBUILD_TESTING="$(usex test)"
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-DBUILD_EXAMPLES="$(usex examples)"
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-DITK_USE_REVIEW="$(usex review)"
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-DITK_INSTALL_LIBRARY_DIR=$(get_libdir)
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)
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if use fftw; then
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mycmakeargs+=(
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-DUSE_FFTWD=ON
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-DUSE_FFTWF=ON
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-DUSE_SYSTEM_FFTW=ON
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-DITK_WRAP_double=ON
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-DITK_WRAP_vector_double=ON
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-DITK_WRAP_covariant_vector_double=ON
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-DITK_WRAP_complex_double=ON
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)
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fi
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if use vtkglue; then
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mycmakeargs+=(
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-DModule_ITKVtkGlue=ON
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)
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fi
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if use python; then
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mycmakeargs+=(
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-DITK_WRAP_PYTHON=ON
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-DITK_WRAP_DIMS="${ITK_WRAP_DIMS:-2;3}"
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)
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else
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mycmakeargs+=(
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-DITK_WRAP_PYTHON=OFF
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)
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fi
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cmake-utils_src_configure
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}
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src_install() {
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cmake-utils_src_install
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if use examples; then
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insinto /usr/share/doc/${PF}/examples
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docompress -x /usr/share/doc/${PF}/examples
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doins -r "${S}"/Examples/*
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fi
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echo "ITK_DATA_ROOT=${EROOT%/}/usr/share/${PN}/data" > ${T}/40${PN}
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local ldpath="${EROOT%/}/usr/$(get_libdir)/InsightToolkit"
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if use python; then
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echo "PYTHONPATH=${EROOT%/}/usr/$(get_libdir)/InsightToolkit/WrapITK/Python" >> "${T}"/40${PN}
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ldpath="${ldpath}:${EROOT%/}/usr/$(get_libdir)/InsightToolkit/WrapITK/lib"
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fi
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echo "LDPATH=${ldpath}" >> "${T}"/40${PN}
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doenvd "${T}"/40${PN}
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if use doc; then
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insinto /usr/share/doc/${PF}/api-docs
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cd "${WORKDIR}"/html
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rm *.md5 || die "Failed to remove superfluous hashes"
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einfo "Installing API docs. This may take some time."
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insinto /usr/share/doc/${PF}/api-docs
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doins -r *
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fi
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}
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@ -1,23 +0,0 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="project">
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<email>maintainer-wanted@gentoo.org</email>
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</maintainer>
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<maintainer type="project">
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<email>sci-biology@gentoo.org</email>
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<name>Gentoo Biology Project</name>
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</maintainer>
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<longdescription lang="en">
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Insight Segmentation and Registration Toolkit (ITK) is a library
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that provides developers with an extensive suite of tools for image
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analysis.
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</longdescription>
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<use>
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<flag name="review">Enable compilation of methods under review</flag>
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<flag name="vtkglue">PLEASE FIX MY DESCRIPTION</flag>
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</use>
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<upstream>
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<remote-id type="sourceforge">itk</remote-id>
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</upstream>
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</pkgmetadata>
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