dev-python/nwb-conversion-tools: new package (DANDI ephys stack)
Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Horea Christian <chr@chymera.eu>
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dev-python/nwb-conversion-tools/ChangeLog
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dev-python/nwb-conversion-tools/ChangeLog
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*nwb-conversion-tools-0.9.3 (19 Oct 2021)
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19 Oct 2021; <chymera@gentoo.org>
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+files/nwb-conversion-tools-0.9.3-no-git-versioncheck.patch, +metadata.xml,
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+nwb-conversion-tools-0.9.3.ebuild:
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dev-python/nwb-conversion-tools: new package (DANDI ephys stack)
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dev-python/nwb-conversion-tools/Manifest
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dev-python/nwb-conversion-tools/Manifest
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DIST nwb-conversion-tools-0.9.3.tar.gz 8516667 SHA256 4a87c4d014c7737db469acb86bb7f5434bbdc271316f60b1bd3f145258279215 SHA512 24c3c8cd8ae7cdec14a758890cbd6c24b2cc02c6b6468aadb94b5f6ce6ff88feea626e7febc3a9b3ea993019012e0b6bc6d31c91fa3810a0ea92d5625769e955 WHIRLPOOL 27c040d18a84cc41c04397952318d26b9dfe0521b5daaf8c62fea877d55cfeda967fd9664c849c753e0024b1e2b2f7d7dc94bb3e6e2f2bde6991911b5d422e0b
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--- a/setup.py 2021-10-19 07:59:23.483551681 -0400
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+++ b/setup.py 2021-10-19 08:00:20.289169440 -0400
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@@ -22,10 +22,6 @@
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with open(os.path.join(here, req_file)) as f:
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install_requires = f.read().strip().split("\n")
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-# Get remote version
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-remote_version = subprocess.run(["git", "describe", "--tags"], stdout=subprocess.PIPE).stdout.decode("utf-8").strip()
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-assert "." in remote_version
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-
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setup(
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name="nwb-conversion-tools",
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version="0.9.3",
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dev-python/nwb-conversion-tools/metadata.xml
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dev-python/nwb-conversion-tools/metadata.xml
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<?xml version='1.0' encoding='UTF-8'?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="person">
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<email>gentoo@chymera.eu</email>
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<name>Horea Christian</name>
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</maintainer>
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<maintainer type="project">
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<email>sci@gentoo.org</email>
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<name>Gentoo Science Project</name>
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</maintainer>
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<upstream>
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<remote-id type="github">SpikeInterface/spikeinterface</remote-id>
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</upstream>
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</pkgmetadata>
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# Copyright 2021 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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PYTHON_COMPAT=( python3_{8..9} )
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# 3.10 missing on numba and spyking-circus
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inherit distutils-r1
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DESCRIPTION="Create NWB files by converting proprietary formats and adding essential metadata"
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HOMEPAGE="https://github.com/catalystneuro/nwb-conversion-tools"
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SRC_URI="https://github.com/catalystneuro/nwb-conversion-tools/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS="~amd64"
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IUSE="test"
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#RESTRICT="test"
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RDEPEND="
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dev-python/h5py[${PYTHON_USEDEP}]
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dev-python/jsonschema[${PYTHON_USEDEP}]
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dev-python/lxml[${PYTHON_USEDEP}]
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dev-python/natsort[${PYTHON_USEDEP}]
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dev-python/neo[${PYTHON_USEDEP}]
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/pandas[${PYTHON_USEDEP}]
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dev-python/psutil[${PYTHON_USEDEP}]
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dev-python/pynwb[${PYTHON_USEDEP}]
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dev-python/pyyaml[${PYTHON_USEDEP}]
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dev-python/scipy[${PYTHON_USEDEP}]
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dev-python/spikeextractors[${PYTHON_USEDEP}]
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dev-python/tqdm[${PYTHON_USEDEP}]
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"
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# also needs:
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# spikesorters
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# spiketoolkit
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# neo == 0.9.0, actually
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# roiextractors
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DEPEND="
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test? (
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${RDEPEND}
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)
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"
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BDEPEND=""
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PATCHES=(
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"${FILESDIR}/${PN}-0.9.3-no-git-versioncheck.patch"
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)
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distutils_enable_tests pytest
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