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added torchio ebuild

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Jimmy2027 2020-12-07 09:51:38 +01:00
parent 6045f9490d
commit 9012867b6c
3 changed files with 57 additions and 0 deletions

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DIST torchio-0.17.42.tar.gz 23194366 SHA256 afc1a26c61cdaabd34bc44992a0afa72c2130a1d8aa509bdbe7326c4e6546caa SHA512 c6a2696a2b76d3699eb47f77ce490f0aff4aea93bf4d6e64a2bf96801d098f9e898a7f6dd657581aadb3f7edb46f40c1676a31c2c6ded14a38f9457536c07d1e WHIRLPOOL 47733cc96b417a0b2c401a6b98600955a8ff003edc42e50cf328151631a74decac3a3a8dfcdc30be3d6a687b9240a5b9fe8d8e18c8f4a1b3c743918d0627f6b7

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<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
<email>klugh@ethz.ch</email>
<name>Hendrik Klug</name>
</maintainer>
<longdescription>
TorchIO is a Python package containing a set of tools to efficiently read,
preprocess, sample, augment, and write 3D medical images in deep learning
applications written in PyTorch, including intensity and spatial transforms
for data augmentation and preprocessing. Transforms include typical computer
vision operations such as random affine transformations and also
domain-specific ones such as simulation of intensity artifacts due to MRI
magnetic field inhomogeneity or k-space motion artifacts.
</longdescription>
<upstream>
<remote-id type="github">fepegar/torchio</remote-id>
</upstream>
</pkgmetadata>

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# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
PYTHON_COMPAT=( python3_{6,7,8} )
DISTUTILS_SINGLE_IMPL=1
DISTUTILS_USE_SETUPTOOLS=rdepend
inherit distutils-r1
DESCRIPTION="A set of tools to efficiently read, preprocess, sample, augment, and write 3D medical images in deep learning applications."
HOMEPAGE="https://torchio.readthedocs.io/"
SRC_URI="https://github.com/fepegar/torchio/archive/v${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64 ~x86"
LICENSE="MIT license"
SLOT="0"
IUSE=""
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
DEPEND="
$(python_gen_cond_dep '
dev-python/click[${PYTHON_USEDEP}]
dev-python/humanize[${PYTHON_USEDEP}]
sci-libs/nibabel[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/deprecation[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
>=sci-libs/pytorch-1.1[${PYTHON_USEDEP}]
dev-python/tqdm[${PYTHON_USEDEP}]
')
sci-libs/simpleitk[${PYTHON_SINGLE_USEDEP}]
"
RDEPEND="${DEPEND}"
distutils_enable_tests pytest