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Merge pull request #38 from kiwifb/fsl6blas

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sci-biology/fsl: use generic blas/lapack revert stuff.
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Horea Christian 2019-11-14 22:37:19 +01:00 committed by GitHub
commit 8eff8d0680
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2 changed files with 9 additions and 6 deletions
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3
sci-biology/fsl/ChangeLog
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@ -1,3 +1,6 @@
14 Nov 2019; François Bissey <frp.bissey@gmail.com> fsl-6.0.2.ebuild:
sci-biology/fsl: use generic blas/lapack revert stuff.
08 Nov 2019; François Bissey <frp.bissey@gmail.com> fsl-6.0.2.ebuild: 08 Nov 2019; François Bissey <frp.bissey@gmail.com> fsl-6.0.2.ebuild:
sci-biology/fsl: final touches. Skip mist-clean. sci-biology/fsl: final touches. Skip mist-clean.

12
sci-biology/fsl/fsl-6.0.2.ebuild
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@ -25,8 +25,8 @@ DEPEND="
sys-libs/zlib sys-libs/zlib
dev-lang/tcl:0= dev-lang/tcl:0=
dev-lang/tk:0= dev-lang/tk:0=
virtual/lapack >=virtual/lapack-3.8
virtual/blas >=virtual/blas-3.8
" "
RDEPEND="${DEPEND}" RDEPEND="${DEPEND}"
@ -78,10 +78,6 @@ src_prepare(){
$(grep -rl "\${FSLDIR}/bin" etc/matlab/*)\ $(grep -rl "\${FSLDIR}/bin" etc/matlab/*)\
$(grep -rl "\$FSLDIR/bin" etc/matlab/*) || die $(grep -rl "\$FSLDIR/bin" etc/matlab/*) || die
# Not caught by the previous sed. Usually append
sed -e "s:\${FSLDIR}/bin::g" \
-i $(grep -rl "\${FSLDIR}/bin" src/*) || die
sed -e "s:\$FSLDIR/data:${EPREFIX}/usr/share/fsl/data:g" \ sed -e "s:\$FSLDIR/data:${EPREFIX}/usr/share/fsl/data:g" \
-e "s:\${FSLDIR}/data:${EPREFIX}/usr/share/fsl/data:g" \ -e "s:\${FSLDIR}/data:${EPREFIX}/usr/share/fsl/data:g" \
-i $(grep -rl "\$FSLDIR/data" src/*) \ -i $(grep -rl "\$FSLDIR/data" src/*) \
@ -100,6 +96,10 @@ src_prepare(){
-i $(grep -rlI "\$FSLDIR/etc" *) \ -i $(grep -rlI "\$FSLDIR/etc" *) \
-i $(grep -rlI "\${FSLDIR}/etc" *) || die -i $(grep -rlI "\${FSLDIR}/etc" *) || die
# Use generic blas/lapack rather than openblas
sed -e "s:-lopenblas:-llapack -lblas:g" \
-i $(grep -rlI lopenblas *) || die
# script wanting to have access to flsversion at buildtime # script wanting to have access to flsversion at buildtime
sed -e "s:/etc/fslversion:${S}/etc/fslversion:g" \ sed -e "s:/etc/fslversion:${S}/etc/fslversion:g" \
-i ${makefilelist} || die -i ${makefilelist} || die