gentoo-related/TheChymera-overlay
gentoo-related/TheChymera-overlay
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Using system GTS

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Horea Christian 2024-01-11 11:35:28 -05:00
parent 953eaa4392
commit 8ef111bdcd
1 changed files with 8 additions and 5 deletions
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13
sci-biology/afni/afni-9999.ebuild
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@ -17,11 +17,11 @@ GIFTI_HASH="5eae81ba1e87ef3553df3b6ba585f12dc81a0030"
DESCRIPTION="Advanced Normalitazion Tools for neuroimaging" DESCRIPTION="Advanced Normalitazion Tools for neuroimaging"
HOMEPAGE="http://stnava.github.io/ANTs/" HOMEPAGE="http://stnava.github.io/ANTs/"
SRC_URI=" SRC_URI="
https://github.com/leej3/gts/archive/${GTS_HASH}.tar.gz
https://github.com/NIFTI-Imaging/nifti_clib/archive/${NIFTI_HASH}.tar.gz https://github.com/NIFTI-Imaging/nifti_clib/archive/${NIFTI_HASH}.tar.gz
https://github.com/NIFTI-Imaging/gifti_clib/archive/${GIFTI_HASH}.tar.gz https://github.com/NIFTI-Imaging/gifti_clib/archive/${GIFTI_HASH}.tar.gz
" "
EGIT_REPO_URI="https://github.com/leej3/afni.git" #https://github.com/leej3/gts/archive/${GTS_HASH}.tar.gz
EGIT_REPO_URI="https://github.com/TheChymera/afni.git"
EGIT_BRANCH="make_some_build_fixes_for_gentoo_packaging" EGIT_BRANCH="make_some_build_fixes_for_gentoo_packaging"
SLOT="0" SLOT="0"
@ -41,6 +41,7 @@ RDEPEND="
media-libs/qhull media-libs/qhull
media-video/mpeg-tools media-video/mpeg-tools
sci-libs/gsl sci-libs/gsl
sci-libs/gts
sys-devel/llvm:* sys-devel/llvm:*
sys-libs/libomp sys-libs/libomp
dev-libs/libpthread-stubs dev-libs/libpthread-stubs
@ -62,8 +63,8 @@ DEPEND="
#Update jpeg-compat to virtual/jpeg:0 #Update jpeg-compat to virtual/jpeg:0
# look for xmhtlm # look for xmhtlm
#tar xf "${DISTDIR}/${GTS_HASH}.tar.gz" || die
src_prepare() { src_prepare() {
tar xf "${DISTDIR}/${GTS_HASH}.tar.gz" || die
tar xf "${DISTDIR}/${NIFTI_HASH}.tar.gz" || die tar xf "${DISTDIR}/${NIFTI_HASH}.tar.gz" || die
tar xf "${DISTDIR}/${GIFTI_HASH}.tar.gz" || die tar xf "${DISTDIR}/${GIFTI_HASH}.tar.gz" || die
cmake_src_prepare cmake_src_prepare
@ -76,19 +77,21 @@ src_configure() {
export GIT_REPO_VERSION=3.0.1.1 export GIT_REPO_VERSION=3.0.1.1
#export LDFLAGS="-lpthread ${LDFLAGS}" #export LDFLAGS="-lpthread ${LDFLAGS}"
#-CC="$(tc-getCC)" #-CC="$(tc-getCC)"
#-DFETCHCONTENT_SOURCE_DIR_GTS="${WORKDIR}/${P}/gts-${GTS_HASH}"
#-DUSE_SYSTEM_GTS=OFF
local mycmakeargs=( local mycmakeargs=(
-GNinja -GNinja
-DLIBDIR=/usr/$(get_libdir) -DLIBDIR=/usr/$(get_libdir)
-DNIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir) -DNIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
-DGIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir) -DGIFTI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
-DGIFTI_INSTALL_LIB_DIR=/usr/$(get_libdir)
-DAFNI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir) -DAFNI_INSTALL_LIBRARY_DIR=/usr/$(get_libdir)
-DCMAKE_INSTALL_LIBDIR=/usr/$(get_libdir) -DCMAKE_INSTALL_LIBDIR=/usr/$(get_libdir)
-DCOMP_COREBINARIES=ON -DCOMP_COREBINARIES=ON
-DUSE_SYSTEM_NIFTI=OFF -DUSE_SYSTEM_NIFTI=OFF
-DUSE_SYSTEM_GIFTI=OFF -DUSE_SYSTEM_GIFTI=OFF
-DUSE_SYSTEM_XMHTML=OFF -DUSE_SYSTEM_XMHTML=OFF
-DUSE_SYSTEM_GTS=OFF -DUSE_SYSTEM_GTS=ON
-DFETCHCONTENT_SOURCE_DIR_GTS="${WORKDIR}/${P}/gts-${GTS_HASH}"
-DFETCHCONTENT_SOURCE_DIR_NIFTI_CLIB="${WORKDIR}/${P}/nifti_clib-${NIFTI_HASH}" -DFETCHCONTENT_SOURCE_DIR_NIFTI_CLIB="${WORKDIR}/${P}/nifti_clib-${NIFTI_HASH}"
-DFETCHCONTENT_SOURCE_DIR_GIFTI_CLIB="${WORKDIR}/${P}/gifti_clib-${GIFTI_HASH}" -DFETCHCONTENT_SOURCE_DIR_GIFTI_CLIB="${WORKDIR}/${P}/gifti_clib-${GIFTI_HASH}"
-DCOMP_GUI=ON -DCOMP_GUI=ON