From 61e8a9c0b30d6ac374a2d06686ca313f96826117 Mon Sep 17 00:00:00 2001
From: Horea Christian <horea.christ@yandex.com>
Date: Mon, 8 Oct 2018 05:38:12 +0200
Subject: [PATCH] NEw package

ahead of inclusion in master
---
 sci-visualization/fsleyes/Manifest            |  1 +
 .../fsleyes/files/fsleyes-0.26.2-fsldir.patch | 14 +++++
 .../fsleyes/fsleyes-0.26.2.ebuild             | 56 +++++++++++++++++++
 3 files changed, 71 insertions(+)
 create mode 100644 sci-visualization/fsleyes/Manifest
 create mode 100644 sci-visualization/fsleyes/files/fsleyes-0.26.2-fsldir.patch
 create mode 100644 sci-visualization/fsleyes/fsleyes-0.26.2.ebuild

diff --git a/sci-visualization/fsleyes/Manifest b/sci-visualization/fsleyes/Manifest
new file mode 100644
index 0000000..c5172b5
--- /dev/null
+++ b/sci-visualization/fsleyes/Manifest
@@ -0,0 +1 @@
+DIST fsleyes-0.26.2.tar.gz 82646638 SHA256 d702c8905eaadeb38ac5393a0207074c37639f7a74acc4b1f7e04a84bd17b9f6 SHA512 36bb376726f7cafd2b850686230077f1c4d65692c9d76259a3278e2e1e8bec3df86d0a2439262b56f9ab2d10519fddd89cbbfa5b2fd4c218820b10ecebae59d3 WHIRLPOOL 90737e94f1f7fa9d03f93d5946598a55eb6955170ef6b94e2d7cfb30deb0063daaf30cabf6db052ee9c8a78f5535c2cc003b437d4234d04957c6985d203dc2ad
diff --git a/sci-visualization/fsleyes/files/fsleyes-0.26.2-fsldir.patch b/sci-visualization/fsleyes/files/fsleyes-0.26.2-fsldir.patch
new file mode 100644
index 0000000..51392f5
--- /dev/null
+++ b/sci-visualization/fsleyes/files/fsleyes-0.26.2-fsldir.patch
@@ -0,0 +1,14 @@
+--- a/fsleyes/main.py	2018-09-24 17:46:07.756686411 +0200
++++ b/fsleyes/main.py	2018-10-06 14:36:53.328135230 +0200
+@@ -325,11 +325,6 @@
+         app.SetTopWindow(frame)
+         frame.Show()
+ 
+-        # Check that $FSLDIR is set, complain
+-        # to the user if it isn't
+-        if not namespace[0].skipfslcheck:
+-            wx.CallAfter(fslDirWarning, frame)
+-
+         # Check for updates. Ignore point
+         # releases, otherwise users might
+         # get swamped with update notifications.
diff --git a/sci-visualization/fsleyes/fsleyes-0.26.2.ebuild b/sci-visualization/fsleyes/fsleyes-0.26.2.ebuild
new file mode 100644
index 0000000..82cff92
--- /dev/null
+++ b/sci-visualization/fsleyes/fsleyes-0.26.2.ebuild
@@ -0,0 +1,56 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_5,3_6} )
+
+inherit distutils-r1
+
+MY_HASH="bfc2c0919b68583b6237cbdd9492e69a7bed30189b19dd21f7ba59f9f39e"
+
+DESCRIPTION="The new FSL image viewer, released with FSL 5.0.10"
+HOMEPAGE="https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/tree/master"
+SRC_URI="https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/-/archive/${PV}/${P}.tar.gz"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="test"
+
+DEPEND="
+	test? (
+		${RDEPEND}
+		dev-python/mock[${PYTHON_USEDEP}]
+		dev-python/pytest[${PYTHON_USEDEP}]
+		)
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	"
+
+RDEPEND="
+	dev-python/fslpy[${PYTHON_USEDEP}]
+	=dev-python/jinja-2*[${PYTHON_USEDEP}]
+	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
+	>=dev-python/numpy-1.14.0[${PYTHON_USEDEP}]
+	>=dev-python/pillow-3.4.2[${PYTHON_USEDEP}]
+	>=dev-python/pyopengl-3.1.0[${PYTHON_USEDEP}]
+	>=dev-python/pyopengl_accelerate-3.1.0[${PYTHON_USEDEP}]
+	=dev-python/pyparsing-2*[${PYTHON_USEDEP}]
+	=dev-python/six-1*[${PYTHON_USEDEP}]
+	>=dev-python/wxpython-3.0.2.0[${PYTHON_USEDEP}]
+	>=sci-libs/scipy-0.18[${PYTHON_USEDEP}]
+	=sci-libs/nibabel-2*[${PYTHON_USEDEP}]
+	sci-visualization/fsleyes-widgets[${PYTHON_USEDEP}]
+	sci-visualization/fsleyes-props[${PYTHON_USEDEP}]
+	"
+
+PATCHES=( "${FILESDIR}/${P}-fsldir.patch" )
+
+src_prepare() {
+	sed -i -e "s/Pillow>=3.2.0,<5.0/Pillow>=3.2.0/g" requirements.txt
+	distutils-r1_src_prepare
+}
+
+python_test() {
+	pytest -v || die
+}