From 99cc6c48240d39a137bfbd4b67ad24cde027baf9 Mon Sep 17 00:00:00 2001
From: Horea Christian <horea.christ@yandex.com>
Date: Sun, 19 Feb 2017 23:17:15 +0100
Subject: [PATCH 1/2] removed deprecated ebuild

---
 app-misc/godep/godep-9999.ebuild | 44 --------------------------------
 1 file changed, 44 deletions(-)
 delete mode 100644 app-misc/godep/godep-9999.ebuild

diff --git a/app-misc/godep/godep-9999.ebuild b/app-misc/godep/godep-9999.ebuild
deleted file mode 100644
index 38ba91d..0000000
--- a/app-misc/godep/godep-9999.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI="5"
-
-inherit git-r3
-
-RESTRICT="strip"
-
-DESCRIPTION="native bindings for the FUSE kernel module"
-HOMEPAGE="https://github.com/tools/godep"
-EGIT_REPO_URI="https://github.com/tools/${PN}.git"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS=""
-IUSE=""
-
-DEPEND="dev-lang/go"
-RDEPEND=""
-
-GO_PN="github.com/tools/${PN}"
-EGIT_CHECKOUT_DIR="${S}/src/${GO_PN}"
-
-export GOPATH="${S}"
-
-src_prepare() {
-	go get ${GO_PN}
-}
-
-src_compile() {
-	go build -v -x -work ${GO_PN} || die
-}
-
-src_install() {
-#	go install -v -x -work ${GO_PN} || die
-
-dobin ${S}/bin/godep
-#insinto /usr/lib/go/
-#doins -r "${S}/pkg"
-#insinto /usr/lib/go/src/pkg
-#doins -r "${S}/src/."
-}

From 999ee5cc96e5d2465e5a3e8ddaf9f7a8805b539d Mon Sep 17 00:00:00 2001
From: Horea Christian <horea.christ@yandex.com>
Date: Sun, 19 Feb 2017 23:19:48 +0100
Subject: [PATCH 2/2] added nipype ebuild for chymeric upstream

---
 sci-libs/nipype/nipype-9999.ebuild | 52 ++++++++++++++++++++++++++++++
 1 file changed, 52 insertions(+)
 create mode 100644 sci-libs/nipype/nipype-9999.ebuild

diff --git a/sci-libs/nipype/nipype-9999.ebuild b/sci-libs/nipype/nipype-9999.ebuild
new file mode 100644
index 0000000..39dfd97
--- /dev/null
+++ b/sci-libs/nipype/nipype-9999.ebuild
@@ -0,0 +1,52 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5} )
+PYTHON_REQ_USE="threads(+),sqlite"
+
+inherit distutils-r1 git-r3
+
+DESCRIPTION="Neuroimaging in Python: Pipelines and Interfaces"
+HOMEPAGE="http://nipy.sourceforge.net/nipype/"
+SRC_URI=""
+EGIT_REPO_URI="https://github.com/TheChymera/nipype"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS=""
+IUSE="test"
+
+DEPEND="
+	dev-python/future[${PYTHON_USEDEP}]
+	dev-python/prov[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	sci-libs/nibabel[${PYTHON_USEDEP}]
+	test? ( dev-python/mock[${PYTHON_USEDEP}] )
+	$(python_gen_cond_dep 'dev-python/configparser[${PYTHON_USEDEP}]' python2_7)
+	"
+RDEPEND="
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/pydotplus[${PYTHON_USEDEP}]
+	dev-python/pygraphviz[${PYTHON_USEDEP}]
+	dev-python/traits[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	dev-python/simplejson[${PYTHON_USEDEP}]
+	"
+
+python_prepare_all() {
+	distutils-r1_python_prepare_all
+	EXISTING_REQUIRE="setup_requires=\['future', 'configparser'\]"
+	CORRECTED_REQUIRE="setup_requires=\['future'\]"
+	sed \
+		-e "s/${EXISTING_REQUIRE}/${CORRECTED_REQUIRE}/g" \
+		-i setup.py \
+		|| die "sed setup.py"
+}
+
+python_test() {
+	nosetests -v || die
+}