Merge branch 'master' of github.com:TheChymera/overlay
This commit is contained in:
Horea Christian
commit
4b2e9460ee
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="person">
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<email>klugh@ethz.ch</email>
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<name>Hendrik Klug</name>
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</maintainer>
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<longdescription>
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Get notified via a telegram bot when your bash command finished.
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</longdescription>
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<upstream>
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<remote-id type="github">Jimmy2027/NORBY</remote-id>
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</upstream>
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</pkgmetadata>
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# Copyright 1999-2020 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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PYTHON_COMPAT=( python3_{7..9} )
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inherit distutils-r1
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inherit git-r3
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DESCRIPTION="Get notified via a telegram bot when your bash command finished."
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HOMEPAGE="https://github.com/Jimmy2027/NORBY"
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#SRC_URI="https://github.com/Jimmy2027/NORBY/archive/${PV}.tar.gz -> ${P}.tar.gz"
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EGIT_REPO_URI="https://github.com/Jimmy2027/NORBY.git"
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KEYWORDS="~amd64 ~x86"
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LICENSE="GNU General Public License v3.0"
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SLOT="0"
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DEPEND="
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dev-python/requests
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"
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RDEPEND="${DEPEND}"
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src_unpack() {
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git-r3_src_unpack
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}
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python_install_all() {
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distutils-r1_python_install_all
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}
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DIST rat-brain-atlases-0.1.tar.xz 4784449120 SHA256 8bf10b2737ebacf2658b09a97a76455775e1b86aedaa2bef3fd538e960fc5310 SHA512 0fbd4991bbf8767029ca0aac456b48926b6e02f6d1a35ba462502ec41242ed9bc1c1827ad28e32518d024c84d71baca54148f38420980a4da2193de92e29aaf0 WHIRLPOOL cdba1192810adf1d34c93f0084fc99abc83a6ee9a0b5cf641da3b108759af4ffafeefa49e25e5635be4d54630813b7cf1ed7c4ade0fc347c2416ac572db8d734
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@ -0,0 +1,16 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="person">
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<email>horea.christ@gmail.com</email>
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<name>Horea Christian</name>
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</maintainer>
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<maintainer type="project">
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<email>sci@gentoo.org</email>
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<name>Gentoo Science Project</name>
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</maintainer>
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<longdescription lang="en">
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Digital rat brain atlases in NIfTI format for use in magnetic
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resonance rat brain imaging.
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</longdescription>
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</pkgmetadata>
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# Copyright 2020 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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DESCRIPTION="A collection of rat brain atlases in NIfTI format"
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HOMEPAGE="https://github.com/IBT-FMI/rat-brain-atlases"
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SRC_URI="http://chymera.eu/distfiles/${P}.tar.xz"
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LICENSE="fairuse"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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pkg_pretend() {
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CHECKREQS_DISK_BUILD="42G"
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check-reqs_pkg_pretend
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}
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# We disable this phase to not check requirements twice.
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pkg_setup() { :; }
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src_install() {
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insinto "/usr/share/${PN}"
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doins *
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}
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DIST torchio-0.17.42.tar.gz 23194366 SHA256 afc1a26c61cdaabd34bc44992a0afa72c2130a1d8aa509bdbe7326c4e6546caa SHA512 c6a2696a2b76d3699eb47f77ce490f0aff4aea93bf4d6e64a2bf96801d098f9e898a7f6dd657581aadb3f7edb46f40c1676a31c2c6ded14a38f9457536c07d1e WHIRLPOOL 47733cc96b417a0b2c401a6b98600955a8ff003edc42e50cf328151631a74decac3a3a8dfcdc30be3d6a687b9240a5b9fe8d8e18c8f4a1b3c743918d0627f6b7
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@ -0,0 +1,20 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="person">
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<email>klugh@ethz.ch</email>
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<name>Hendrik Klug</name>
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</maintainer>
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<longdescription>
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TorchIO is a Python package containing a set of tools to efficiently read,
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preprocess, sample, augment, and write 3D medical images in deep learning
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applications written in PyTorch, including intensity and spatial transforms
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for data augmentation and preprocessing. Transforms include typical computer
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vision operations such as random affine transformations and also
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domain-specific ones such as simulation of intensity artifacts due to MRI
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magnetic field inhomogeneity or k-space motion artifacts.
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</longdescription>
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<upstream>
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<remote-id type="github">fepegar/torchio</remote-id>
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</upstream>
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</pkgmetadata>
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@ -0,0 +1,36 @@
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# Copyright 1999-2020 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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PYTHON_COMPAT=( python3_{6,7,8} )
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DISTUTILS_SINGLE_IMPL=1
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DISTUTILS_USE_SETUPTOOLS=rdepend
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inherit distutils-r1
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DESCRIPTION="A set of tools to efficiently read, preprocess, sample, augment, and write 3D medical images in deep learning applications."
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HOMEPAGE="https://torchio.readthedocs.io/"
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SRC_URI="https://github.com/fepegar/torchio/archive/v${PV}.tar.gz -> ${P}.tar.gz"
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KEYWORDS="~amd64 ~x86"
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LICENSE="MIT license"
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SLOT="0"
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IUSE=""
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REQUIRED_USE="${PYTHON_REQUIRED_USE}"
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DEPEND="
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$(python_gen_cond_dep '
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dev-python/click[${PYTHON_USEDEP}]
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dev-python/humanize[${PYTHON_USEDEP}]
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sci-libs/nibabel[${PYTHON_USEDEP}]
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/deprecation[${PYTHON_USEDEP}]
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dev-python/scipy[${PYTHON_USEDEP}]
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>=sci-libs/pytorch-1.1[${PYTHON_USEDEP}]
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dev-python/tqdm[${PYTHON_USEDEP}]
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')
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sci-libs/simpleitk[${PYTHON_SINGLE_USEDEP}]
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"
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RDEPEND="${DEPEND}"
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distutils_enable_tests pytest
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