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sci-biology/ants: building from tarball, failing

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Package-Manager: Portage-2.3.99, Repoman-2.3.22
Signed-off-by: Horea Christian <chr@chymera.eu>
This commit is contained in:
Horea Christian 2020-05-16 05:57:01 -04:00
parent 6ae51eab8d
commit 394fdd4ebe
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GPG Key ID: EAA9223EE3BB378A
4 changed files with 18 additions and 5 deletions
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5
profiles/package.mask
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@ -34,3 +34,8 @@
# Issues with new dependencies: # Issues with new dependencies:
# https://github.com/nipy/nipype/issues/3196 # https://github.com/nipy/nipype/issues/3196
=sci-libs/nipype-1.4.2 =sci-libs/nipype-1.4.2
# Horea Christian <chr@chymera.eu> (16 Mai 2020)
# Fails when building from tarball:
# https://github.com/ANTsX/ANTs/issues/1002
=sci-biology/ants-2.3.1_p20191013

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sci-biology/ants/ChangeLog
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@ -1,3 +1,6 @@
16 May 2020; <chymera@gentoo.org> ants-2.3.1_p20191013.ebuild:
sci-biology/ants: building from tarball, failing
*ants-2.3.1_p20191013 (14 Dec 2019) *ants-2.3.1_p20191013 (14 Dec 2019)
14 Dec 2019; <chymera@gentoo.org> +ants-2.3.1_p20191013.ebuild, 14 Dec 2019; <chymera@gentoo.org> +ants-2.3.1_p20191013.ebuild,

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sci-biology/ants/Manifest
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@ -1 +1,2 @@
DIST 2.3.1_p20191013.tar.gz 2445357 SHA256 819e60c215e61abff2990eac20520b85083fba78598a49a5a6ff915d7206a0c4 SHA512 3de360f58de63662be7db7704a1e4b74ccba03c656ee68dde7e82f4231cbeb6e9d6c7f20a01dab57d0e54740f1f33acd40d07fbe67673993230c08d8aecd9359 WHIRLPOOL 0338d27a73f0b01a079f80129727d413833771fce306d7e839c5a2d23a6c9da71c8ee751e67928d07791cb927b746039d8c5ae6396d7baa06e6ee3217347198b
DIST ants_testdata-2.3.1_p20191013.tar.xz 25056428 SHA256 df2396d453a37674945612b2248d4ca818fce6a0b2d97beb88ab3bc59d040657 SHA512 0f86b967cd5e6c7481804c5b1dfb8d638a0560fbb08f86f04d9a3dc508a64e3181d056c2c9cdc26cbcf8eae9e45ecb29fa58580a1377ed8733b87b1b04b15ab2 WHIRLPOOL 08a5adb931b4606a0b03e32effc218d4940395472f7c2b62098472fe999cc0f0a452454619eba2bb2da775a0d5e5eb7baa966bdccf087da1d57d781061006422 DIST ants_testdata-2.3.1_p20191013.tar.xz 25056428 SHA256 df2396d453a37674945612b2248d4ca818fce6a0b2d97beb88ab3bc59d040657 SHA512 0f86b967cd5e6c7481804c5b1dfb8d638a0560fbb08f86f04d9a3dc508a64e3181d056c2c9cdc26cbcf8eae9e45ecb29fa58580a1377ed8733b87b1b04b15ab2 WHIRLPOOL 08a5adb931b4606a0b03e32effc218d4940395472f7c2b62098472fe999cc0f0a452454619eba2bb2da775a0d5e5eb7baa966bdccf087da1d57d781061006422

14
sci-biology/ants/ants-2.3.1_p20191013.ebuild
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@ -1,21 +1,23 @@
# Copyright 1999-2019 Gentoo Authors # Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2 # Distributed under the terms of the GNU General Public License v2
EAPI=7 EAPI=7
CMAKE_MAKEFILE_GENERATOR="emake" CMAKE_MAKEFILE_GENERATOR="emake"
inherit cmake-utils git-r3 multilib inherit cmake-utils multilib
MY_COMMIT="f78b2d4a382d3090230641b5ade5da28962dad04"
MY_PN="ANTs"
DESCRIPTION="Advanced Normalitazion Tools for neuroimaging" DESCRIPTION="Advanced Normalitazion Tools for neuroimaging"
HOMEPAGE="http://stnava.github.io/ANTs/" HOMEPAGE="http://stnava.github.io/ANTs/"
SRC_URI=" SRC_URI="
https://github.com/ANTsX/ANTs/archive/${MY_COMMIT}.tar.gz -> ${PV}.tar.gz
test? ( test? (
http://chymera.eu/distfiles/ants_testdata-${PV}.tar.xz http://chymera.eu/distfiles/ants_testdata-${PV}.tar.xz
) )
" "
EGIT_REPO_URI="https://github.com/stnava/ANTs.git"
EGIT_COMMIT="f78b2d4a382d3090230641b5ade5da28962dad04"
SLOT="0" SLOT="0"
LICENSE="BSD" LICENSE="BSD"
@ -36,8 +38,10 @@ PATCHES=(
"${FILESDIR}/${P}-paths.patch" "${FILESDIR}/${P}-paths.patch"
) )
S="${WORKDIR}/${MY_PN}-${MY_COMMIT}"
src_unpack() { src_unpack() {
git-r3_src_unpack default
if use test; then if use test; then
mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory." mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory."
tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data." tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data."