sci-libs/itk: dep change ahead of Gentoo Science
Package-Manager: Portage-2.3.66, Repoman-2.3.12 Signed-off-by: Horea Christian <chr@chymera.eu>
This commit is contained in:
Horea Christian
parent
380d21cbe8
commit
389efa4b90
|
|
@ -0,0 +1,10 @@
|
|||
*itk-5.0_rc1 (18 May 2019)
|
||||
|
||||
18 May 2019; <chymera@gentoo.org>
|
||||
+files/0001-BUG-Wrap-TransformFileReader-TransformFileWriter.patch,
|
||||
+files/0002-COMP-Fixed-itkQuasiNewtonOptimizerv4-wrapping-warnin.patch,
|
||||
+files/0003-COMP-Fixed-itkGradientDescentOptimizerv4-wrapping-wa.patch,
|
||||
+files/0004-COMP-Warp-OptimizerParameterScalesEstimatorTemplate.patch,
|
||||
+files/0005-make-gdcm-helper-library-static.patch,
|
||||
+files/nrrdio-linking.patch, +itk-5.0_rc1.ebuild, +metadata.xml:
|
||||
sci-libs/itk: dep change ahead of Gentoo Science
|
||||
|
|
@ -0,0 +1,2 @@
|
|||
DIST InsightData-5.0rc01.tar.gz 290621965 SHA256 c4b6172809fd86ee623311001bdf7b79e801bddb9bbb8cb7123b2e5cc04f5c4f SHA512 0be5568b75017a4c4cbfc4a4e7b0339537cd2dc23d5d5637a95002e040b96f923851bc354f3a1447d3802444a951b62d2ef66ad2a0db0961bf2bd9f47399fd9a WHIRLPOOL 35668bb25fc4fd6db3b63683cb26d62f46467f3304998ec3ddcd93cd55c9532f9701feda6f9e9e14c9d3a695434ce8c3e68ba916b1e26e3bb53df2f8aae7836b
|
||||
DIST v5.0rc01.tar.gz 20944543 SHA256 fa6cd61bc39ccdc53808b9b0df5dd95d63a3c08be130e63ab0f4b77ca9594e46 SHA512 30e327708c7717bb2131911c86802c4104730d146b4263c68ae89384d3f01a6675b3abf5962af14cc7f40984cb1e8eedd911fe0f084a8deb4c79b4239b309728 WHIRLPOOL 6447eccbb17573233f750e3462dadd4c44c177613ca88520787579cc6e10ac523488e44dbf0f3e690a0cc009443b5adccdf62b588bdf6180dbda4a98b7d03cef
|
||||
|
|
@ -0,0 +1,50 @@
|
|||
From d069b7b94287dae15fcaf707775f5dd2bbebcc38 Mon Sep 17 00:00:00 2001
|
||||
From: Matt McCormick <matt.mccormick@kitware.com>
|
||||
Date: Wed, 5 Feb 2014 15:52:34 -0500
|
||||
Subject: [PATCH 1/3] BUG: Wrap TransformFileReader, TransformFileWriter.
|
||||
|
||||
Missing CMakeLists.txt in the wrapping directory. Need to explicitly include
|
||||
the headers after "Template" was appended to the class name.
|
||||
|
||||
Suggested-by: Sami Koho <sami.koho@gmail.com>
|
||||
|
||||
Change-Id: I6f994bb18f37d5adf1d0f0311fa73506c41239a7
|
||||
---
|
||||
Modules/IO/TransformBase/wrapping/CMakeLists.txt | 3 +++
|
||||
Modules/IO/TransformBase/wrapping/itkTransformFileReader.wrap | 2 ++
|
||||
Modules/IO/TransformBase/wrapping/itkTransformFileWriter.wrap | 2 ++
|
||||
3 files changed, 7 insertions(+)
|
||||
create mode 100644 Modules/IO/TransformBase/wrapping/CMakeLists.txt
|
||||
|
||||
diff --git a/Modules/IO/TransformBase/wrapping/CMakeLists.txt b/Modules/IO/TransformBase/wrapping/CMakeLists.txt
|
||||
new file mode 100644
|
||||
index 0000000..6072567
|
||||
--- /dev/null
|
||||
+++ b/Modules/IO/TransformBase/wrapping/CMakeLists.txt
|
||||
@@ -0,0 +1,3 @@
|
||||
+itk_wrap_module(ITKIOTransformBase)
|
||||
+itk_auto_load_submodules()
|
||||
+itk_end_wrap_module()
|
||||
diff --git a/Modules/IO/TransformBase/wrapping/itkTransformFileReader.wrap b/Modules/IO/TransformBase/wrapping/itkTransformFileReader.wrap
|
||||
index 9b52fbc..662df9e 100644
|
||||
--- a/Modules/IO/TransformBase/wrapping/itkTransformFileReader.wrap
|
||||
+++ b/Modules/IO/TransformBase/wrapping/itkTransformFileReader.wrap
|
||||
@@ -1,3 +1,5 @@
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkTransformFileReader.h")
|
||||
itk_wrap_class("itk::TransformFileReaderTemplate" POINTER)
|
||||
foreach(t ${WRAP_ITK_REAL})
|
||||
itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
diff --git a/Modules/IO/TransformBase/wrapping/itkTransformFileWriter.wrap b/Modules/IO/TransformBase/wrapping/itkTransformFileWriter.wrap
|
||||
index 4f1ac4a..356aaf3 100644
|
||||
--- a/Modules/IO/TransformBase/wrapping/itkTransformFileWriter.wrap
|
||||
+++ b/Modules/IO/TransformBase/wrapping/itkTransformFileWriter.wrap
|
||||
@@ -1,3 +1,5 @@
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkTransformFileWriter.h")
|
||||
itk_wrap_class("itk::TransformFileWriterTemplate" POINTER)
|
||||
foreach(t ${WRAP_ITK_REAL})
|
||||
itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
--
|
||||
1.8.5.3
|
||||
|
||||
|
|
@ -0,0 +1,28 @@
|
|||
From 66d2955fbe5528d9df216c639277d1d2686447e5 Mon Sep 17 00:00:00 2001
|
||||
From: Michka Popoff <michkapopoff@gmail.com>
|
||||
Date: Fri, 7 Feb 2014 19:24:49 +0100
|
||||
Subject: [PATCH 2/3] COMP: Fixed itkQuasiNewtonOptimizerv4 wrapping warnings
|
||||
|
||||
The warning :
|
||||
/scratch/dashboards/Linux-x86_64-gcc4.4-WrapITK/ITK-build/Wrapping/Modules/ITKOptimizersv4/itkQuasiNewtonOptimizerv4.xml: warning(5): Unknown type type: itk::QuasiNewtonOptimizerv4 [typedef]
|
||||
/scratch/dashboards/Linux-x86_64-gcc4.4-WrapITK/ITK-build/Wrapping/Modules/ITKOptimizersv4/itkQuasiNewtonOptimizerv4.xml: warning(4): ITK type not wrapped, or currently not known: itk::QuasiNewtonOptimizerv4Template< double >
|
||||
---
|
||||
.../Numerics/Optimizersv4/wrapping/itkQuasiNewtonOptimizerv4.wrap | 8 +++++++-
|
||||
1 file changed, 7 insertions(+), 1 deletion(-)
|
||||
|
||||
diff --git a/Modules/Numerics/Optimizersv4/wrapping/itkQuasiNewtonOptimizerv4.wrap b/Modules/Numerics/Optimizersv4/wrapping/itkQuasiNewtonOptimizerv4.wrap
|
||||
index 4a43dd4..7eed11c 100644
|
||||
--- a/Modules/Numerics/Optimizersv4/wrapping/itkQuasiNewtonOptimizerv4.wrap
|
||||
+++ b/Modules/Numerics/Optimizersv4/wrapping/itkQuasiNewtonOptimizerv4.wrap
|
||||
@@ -1 +1,7 @@
|
||||
-itk_wrap_simple_class("itk::QuasiNewtonOptimizerv4" POINTER)
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkQuasiNewtonOptimizerv4.h")
|
||||
+itk_wrap_class("itk::QuasiNewtonOptimizerv4Template" POINTER)
|
||||
+ foreach(t ${WRAP_ITK_REAL})
|
||||
+ itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
+ endforeach(t)
|
||||
+itk_end_wrap_class()
|
||||
--
|
||||
1.8.5.3
|
||||
|
||||
|
|
@ -0,0 +1,73 @@
|
|||
From fced46ce8769b4edc7971ea0928045390b5c3f84 Mon Sep 17 00:00:00 2001
|
||||
From: Michka Popoff <michkapopoff@gmail.com>
|
||||
Date: Mon, 10 Feb 2014 09:41:42 +0100
|
||||
Subject: [PATCH 3/3] COMP: Fixed itkGradientDescentOptimizerv4 wrapping
|
||||
warnings
|
||||
|
||||
I splitted the 3 wrapping calls in 3 separate files and fixed the wrapping.
|
||||
|
||||
The warnings :
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4.xml: warning(5): Unknown type type: itk::GradientDescentOptimizerBasev4 [typedef]
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4.xml: warning(5): Unknown type type: itk::GradientDescentOptimizerv4 [typedef]
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4.xml: warning(5): Unknown type type: itk::ObjectToObjectOptimizerBase [typedef]
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4.xml: warning(4): ITK type not wrapped, or currently not known: itk::GradientDescentOptimizerBasev4Template< double >
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4.xml: warning(4): ITK type not wrapped, or currently not known: itk::GradientDescentOptimizerv4Template< double >
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4.xml: warning(4): ITK type not wrapped, or currently not known: itk::ObjectToObjectOptimizerBaseTemplate< double >
|
||||
|
||||
Should also hopefully fix the new error on the dashboard I introduced by fixing the itkQuasiNewtonOptimizerv4 warnings (http://review.source.kitware.com/#/c/14317/)
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Typedefs/itkQuasiNewtonOptimizerv4.i:87: Warning 401: Nothing known about base class 'itk::GradientDescentOptimizerv4Template< float >'. Ignored.
|
||||
/home/kevin/kitware/ITK_Build/Wrapping/Typedefs/itkQuasiNewtonOptimizerv4.i:87: Warning 401: Maybe you forgot to instantiate 'itk::GradientDescentOptimizerv4Template< float >' using %template.
|
||||
|
||||
Change-Id: I15b6af11690ed6efeaced68f73af5212ab5dc364
|
||||
---
|
||||
.../wrapping/itkGradientDescentOptimizerBasev4.wrap | 7 +++++++
|
||||
.../Optimizersv4/wrapping/itkGradientDescentOptimizerv4.wrap | 10 +++++++---
|
||||
.../Optimizersv4/wrapping/itkObjectToObjectOptimizerBase.wrap | 7 +++++++
|
||||
3 files changed, 21 insertions(+), 3 deletions(-)
|
||||
create mode 100644 Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerBasev4.wrap
|
||||
create mode 100644 Modules/Numerics/Optimizersv4/wrapping/itkObjectToObjectOptimizerBase.wrap
|
||||
|
||||
diff --git a/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerBasev4.wrap b/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerBasev4.wrap
|
||||
new file mode 100644
|
||||
index 0000000..74f5a6c
|
||||
--- /dev/null
|
||||
+++ b/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerBasev4.wrap
|
||||
@@ -0,0 +1,7 @@
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkGradientDescentOptimizerBasev4.h")
|
||||
+itk_wrap_class("itk::GradientDescentOptimizerBasev4Template" POINTER)
|
||||
+ foreach(t ${WRAP_ITK_REAL})
|
||||
+ itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
+ endforeach(t)
|
||||
+itk_end_wrap_class()
|
||||
diff --git a/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerv4.wrap b/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerv4.wrap
|
||||
index d53a176..3236448 100644
|
||||
--- a/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerv4.wrap
|
||||
+++ b/Modules/Numerics/Optimizersv4/wrapping/itkGradientDescentOptimizerv4.wrap
|
||||
@@ -1,3 +1,7 @@
|
||||
-itk_wrap_simple_class("itk::ObjectToObjectOptimizerBase" POINTER)
|
||||
-itk_wrap_simple_class("itk::GradientDescentOptimizerBasev4" POINTER)
|
||||
-itk_wrap_simple_class("itk::GradientDescentOptimizerv4" POINTER)
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkGradientDescentOptimizerv4.h")
|
||||
+itk_wrap_class("itk::GradientDescentOptimizerv4Template" POINTER)
|
||||
+ foreach(t ${WRAP_ITK_REAL})
|
||||
+ itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
+ endforeach(t)
|
||||
+itk_end_wrap_class()
|
||||
diff --git a/Modules/Numerics/Optimizersv4/wrapping/itkObjectToObjectOptimizerBase.wrap b/Modules/Numerics/Optimizersv4/wrapping/itkObjectToObjectOptimizerBase.wrap
|
||||
new file mode 100644
|
||||
index 0000000..61b2c44
|
||||
--- /dev/null
|
||||
+++ b/Modules/Numerics/Optimizersv4/wrapping/itkObjectToObjectOptimizerBase.wrap
|
||||
@@ -0,0 +1,7 @@
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkObjectToObjectOptimizerBase.h")
|
||||
+itk_wrap_class("itk::ObjectToObjectOptimizerBaseTemplate" POINTER)
|
||||
+ foreach(t ${WRAP_ITK_REAL})
|
||||
+ itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
+ endforeach(t)
|
||||
+itk_end_wrap_class()
|
||||
--
|
||||
1.8.5.3
|
||||
|
||||
|
|
@ -0,0 +1,30 @@
|
|||
Author: Matt McCormick <matt.mccormick@kitware.com>
|
||||
Date: Thu Feb 6 10:26:49 2014 -0500
|
||||
|
||||
COMP: Wrap OptimizerParameterScalesEstimatorTemplate.
|
||||
|
||||
The class name changed and it became templated. Fixes:
|
||||
|
||||
/playpen/blowekamp/MacOSX-WrapITK/ITK-build/Wrapping/Modules/ITKOptimizersv4/itkOptimizerParameterScalesEstimator.xml:
|
||||
warning(5): Unknown type type: itk::OptimizerParameterScalesEstimator
|
||||
[typedef]
|
||||
/playpen/blowekamp/MacOSX-WrapITK/ITK-build/Wrapping/Modules/ITKOptimizersv4/itkOptimizerParameterScalesEstimator.xml:
|
||||
warning(4): ITK type not wrapped, or currently not known:
|
||||
itk::OptimizerParameterScalesEstimatorTemplate< double >
|
||||
|
||||
Change-Id: Ic6b4d6fba10d5d6c7b58de8d842bad6511e1ae7b
|
||||
|
||||
diff --git a/Modules/Numerics/Optimizersv4/wrapping/itkOptimizerParameterScalesEstimator.wrap b/Modules/Numerics/Optimizersv4/wrapping/itkOptim
|
||||
index efd6a8c..a647ee4 100644
|
||||
--- a/Modules/Numerics/Optimizersv4/wrapping/itkOptimizerParameterScalesEstimator.wrap
|
||||
+++ b/Modules/Numerics/Optimizersv4/wrapping/itkOptimizerParameterScalesEstimator.wrap
|
||||
@@ -1 +1,7 @@
|
||||
-itk_wrap_simple_class("itk::OptimizerParameterScalesEstimator" POINTER)
|
||||
+set(WRAPPER_AUTO_INCLUDE_HEADERS OFF)
|
||||
+itk_wrap_include("itkOptimizerParameterScalesEstimator.h")
|
||||
+itk_wrap_class("itk::OptimizerParameterScalesEstimatorTemplate" POINTER)
|
||||
+ foreach(t ${WRAP_ITK_REAL})
|
||||
+ itk_wrap_template("${ITKM_${t}}" "${ITKT_${t}}")
|
||||
+ endforeach(t)
|
||||
+itk_end_wrap_class()
|
||||
|
||||
|
|
@ -0,0 +1,11 @@
|
|||
diff --git a/Modules/ThirdParty/GDCM/src/CMakeLists.txt b/Modules/ThirdParty/GDCM/src/CMakeLists.txt
|
||||
index e98077c..70f4286 100644
|
||||
--- a/Modules/ThirdParty/GDCM/src/CMakeLists.txt
|
||||
+++ b/Modules/ThirdParty/GDCM/src/CMakeLists.txt
|
||||
@@ -1,5 +1,5 @@
|
||||
if(ITK_USE_SYSTEM_GDCM)
|
||||
- add_library(ITKGDCM ITK-GDCM.cxx)
|
||||
+ add_library(ITKGDCM STATIC ITK-GDCM.cxx)
|
||||
target_link_libraries(ITKGDCM gdcmDICT gdcmMSFF)
|
||||
itk_module_target(ITKGDCM)
|
||||
return()
|
||||
|
|
@ -0,0 +1,15 @@
|
|||
Description: Link libITKNrrdIO with -lm (needed for sqrt)
|
||||
Author: Steve Robbins <smr@debian.org>
|
||||
Forwarded: no
|
||||
|
||||
--- insighttoolkit4-4.5.0.orig/Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeLists.txt
|
||||
+++ insighttoolkit4-4.5.0/Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeLists.txt
|
||||
@@ -64,7 +64,7 @@
|
||||
ADD_DEFINITIONS(-DTEEM_ZLIB=1)
|
||||
|
||||
ADD_LIBRARY(ITKNrrdIO ${nrrdio_SRCS} )
|
||||
-TARGET_LINK_LIBRARIES(ITKNrrdIO ${ITKZLIB_LIBRARIES})
|
||||
+TARGET_LINK_LIBRARIES(ITKNrrdIO ${ITKZLIB_LIBRARIES} -lm)
|
||||
|
||||
IF(ITK_LIBRARY_PROPERTIES)
|
||||
SET_TARGET_PROPERTIES(ITKNrrdIO PROPERTIES ${ITK_LIBRARY_PROPERTIES})
|
||||
|
|
@ -0,0 +1,149 @@
|
|||
# Copyright 1999-2019 Gentoo Authors
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=6
|
||||
|
||||
PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
|
||||
|
||||
inherit eutils toolchain-funcs cmake-utils python-single-r1
|
||||
|
||||
MY_PV="5.0rc01"
|
||||
|
||||
DESCRIPTION="NLM Insight Segmentation and Registration Toolkit"
|
||||
HOMEPAGE="http://www.itk.org"
|
||||
SRC_URI="
|
||||
https://github.com/InsightSoftwareConsortium/ITK/archive/v${MY_PV}.tar.gz
|
||||
test? ( https://github.com/InsightSoftwareConsortium/ITK/releases/download/v5.0rc01/InsightData-${MY_PV}.tar.gz )
|
||||
"
|
||||
RESTRICT="primaryuri"
|
||||
|
||||
LICENSE="Apache-2.0"
|
||||
SLOT="0"
|
||||
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
|
||||
IUSE="debug doc examples fftw python review test vtkglue"
|
||||
|
||||
RDEPEND="
|
||||
dev-libs/double-conversion:0=
|
||||
media-libs/openjpeg:2
|
||||
media-libs/libpng:0=
|
||||
media-libs/tiff:0=
|
||||
sci-libs/dcmtk:0=
|
||||
sci-libs/hdf5:0=[cxx]
|
||||
sys-libs/zlib:0=
|
||||
virtual/jpeg:0=
|
||||
fftw? ( sci-libs/fftw:3.0= )
|
||||
vtkglue? ( sci-libs/vtk:0=[python?] )
|
||||
"
|
||||
DEPEND="${RDEPEND}
|
||||
python? (
|
||||
>=dev-lang/swig-2.0:0
|
||||
dev-cpp/castxml
|
||||
)
|
||||
doc? ( app-doc/doxygen )
|
||||
"
|
||||
|
||||
REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
|
||||
|
||||
S="${WORKDIR}/ITK-${MY_PV}"
|
||||
|
||||
pkg_pretend() {
|
||||
if [[ -z ${ITK_COMPUTER_MEMORY_SIZE} ]]; then
|
||||
elog "To tune ITK to make the best use of working memory you can set"
|
||||
elog " ITK_COMPUTER_MEMORY_SIZE=XX"
|
||||
elog "in make.conf, default is 1 (unit is GB)"
|
||||
fi
|
||||
if use python && [[ -z ${ITK_WRAP_DIMS} ]]; then
|
||||
elog "For Python language bindings, you can define the dimensions"
|
||||
elog "you want to create bindings for by setting"
|
||||
elog " ITK_WRAP_DIMS=X;Y;Z..."
|
||||
elog "in make.conf, default is 2;3 for 2D and 3D data"
|
||||
fi
|
||||
}
|
||||
|
||||
src_prepare() {
|
||||
sed -i -e "s/find_package(OpenJPEG 2.0.0/find_package(OpenJPEG/g"\
|
||||
Modules/ThirdParty/GDCM/src/gdcm/CMakeLists.txt
|
||||
default
|
||||
}
|
||||
|
||||
src_configure() {
|
||||
local mycmakeargs=(
|
||||
-DBUILD_SHARED_LIBS=ON
|
||||
-DITK_USE_SYSTEM_DCMTK=ON
|
||||
-DGDCM_USE_SYSTEM_OPENJPEG=ON
|
||||
-DITK_USE_SYSTEM_DOUBLECONVERSION=ON
|
||||
-DITK_USE_SYSTEM_CASTXML=ON
|
||||
-DITK_USE_SYSTEM_HDF5=ON
|
||||
-DITK_USE_SYSTEM_JPEG=ON
|
||||
-DITK_USE_SYSTEM_PNG=ON
|
||||
-DITK_USE_SYSTEM_SWIG=ON
|
||||
-DITK_USE_SYSTEM_TIFF=ON
|
||||
-DITK_USE_SYSTEM_ZLIB=ON
|
||||
-DITK_USE_KWSTYLE=OFF
|
||||
-DITK_BUILD_DEFAULT_MODULES=ON
|
||||
-DITK_COMPUTER_MEMORY_SIZE="${ITK_COMPUTER_MEMORY_SIZE:-1}"
|
||||
-DWRAP_ITK_JAVA=OFF
|
||||
-DWRAP_ITK_TCL=OFF
|
||||
-Ddouble-conversion_INCLUDE_DIRS="${EPREFIX}/usr/include/double-conversion"
|
||||
-DExternalData_OBJECT_STORES="${WORKDIR}/InsightToolkit-${MY_PV}/.ExternalData"
|
||||
-DBUILD_TESTING="$(usex test ON OFF)"
|
||||
-DBUILD_EXAMPLES="$(usex examples ON OFF)"
|
||||
-DITK_USE_REVIEW="$(usex review ON OFF)"
|
||||
-DITK_INSTALL_LIBRARY_DIR=$(get_libdir)
|
||||
)
|
||||
if use fftw; then
|
||||
mycmakeargs+=(
|
||||
-DUSE_FFTWD=ON
|
||||
-DUSE_FFTWF=ON
|
||||
-DUSE_SYSTEM_FFTW=ON
|
||||
-DITK_WRAP_double=ON
|
||||
-DITK_WRAP_vector_double=ON
|
||||
-DITK_WRAP_covariant_vector_double=ON
|
||||
-DITK_WRAP_complex_double=ON
|
||||
)
|
||||
fi
|
||||
if use vtkglue; then
|
||||
mycmakeargs+=(
|
||||
-DModule_ITKVtkGlue=ON
|
||||
)
|
||||
fi
|
||||
if use python; then
|
||||
mycmakeargs+=(
|
||||
-DITK_WRAP_PYTHON=ON
|
||||
-DITK_WRAP_DIMS="${ITK_WRAP_DIMS:-2;3}"
|
||||
)
|
||||
else
|
||||
mycmakeargs+=(
|
||||
-DITK_WRAP_PYTHON=OFF
|
||||
)
|
||||
fi
|
||||
cmake-utils_src_configure
|
||||
}
|
||||
|
||||
src_install() {
|
||||
cmake-utils_src_install
|
||||
|
||||
if use examples; then
|
||||
insinto /usr/share/doc/${PF}/examples
|
||||
docompress -x /usr/share/doc/${PF}/examples
|
||||
doins -r "${S}"/Examples/*
|
||||
fi
|
||||
|
||||
echo "ITK_DATA_ROOT=${EROOT%/}/usr/share/${PN}/data" > ${T}/40${PN}
|
||||
local ldpath="${EROOT%/}/usr/$(get_libdir)/InsightToolkit"
|
||||
if use python; then
|
||||
echo "PYTHONPATH=${EROOT%/}/usr/$(get_libdir)/InsightToolkit/WrapITK/Python" >> "${T}"/40${PN}
|
||||
ldpath="${ldpath}:${EROOT%/}/usr/$(get_libdir)/InsightToolkit/WrapITK/lib"
|
||||
fi
|
||||
echo "LDPATH=${ldpath}" >> "${T}"/40${PN}
|
||||
doenvd "${T}"/40${PN}
|
||||
|
||||
if use doc; then
|
||||
insinto /usr/share/doc/${PF}/api-docs
|
||||
cd "${WORKDIR}"/html
|
||||
rm *.md5 || die "Failed to remove superfluous hashes"
|
||||
einfo "Installing API docs. This may take some time."
|
||||
insinto /usr/share/doc/${PF}/api-docs
|
||||
doins -r *
|
||||
fi
|
||||
}
|
||||
|
|
@ -0,0 +1,23 @@
|
|||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
|
||||
<pkgmetadata>
|
||||
<maintainer type="project">
|
||||
<email>maintainer-wanted@gentoo.org</email>
|
||||
</maintainer>
|
||||
<maintainer type="project">
|
||||
<email>sci-biology@gentoo.org</email>
|
||||
<name>Gentoo Biology Project</name>
|
||||
</maintainer>
|
||||
<longdescription lang="en">
|
||||
Insight Segmentation and Registration Toolkit (ITK) is a library
|
||||
that provides developers with an extensive suite of tools for image
|
||||
analysis.
|
||||
</longdescription>
|
||||
<use>
|
||||
<flag name="review">Enable compilation of methods under review</flag>
|
||||
<flag name="vtkglue">PLEASE FIX MY DESCRIPTION</flag>
|
||||
</use>
|
||||
<upstream>
|
||||
<remote-id type="sourceforge">itk</remote-id>
|
||||
</upstream>
|
||||
</pkgmetadata>
|
||||
Loading…
Reference in New Issue