diff --git a/sci-biology/ants/ChangeLog b/sci-biology/ants/ChangeLog index a6e2e47..7a89409 100644 --- a/sci-biology/ants/ChangeLog +++ b/sci-biology/ants/ChangeLog @@ -1,3 +1,9 @@ +*ants-2.3.1_p20191013 (14 Dec 2019) + + 14 Dec 2019; +ants-2.3.1_p20191013.ebuild, + -ants-9999.ebuild, metadata.xml: + sci-biology/ants: prefix fix ahead of Gentoo Science + 25 Nov 2019; -ants-2.3.1_p20191013.ebuild: sci-biology/ants: migrated version bump to Gentoo Scinece https://gitweb.gent oo.org/proj/sci.git/commit/?id=402183f38c721910fe038ed4ce04e0a98a37c584 diff --git a/sci-biology/ants/ants-9999.ebuild b/sci-biology/ants/ants-2.3.1_p20191013.ebuild similarity index 71% rename from sci-biology/ants/ants-9999.ebuild rename to sci-biology/ants/ants-2.3.1_p20191013.ebuild index b759acb..060a38c 100644 --- a/sci-biology/ants/ants-9999.ebuild +++ b/sci-biology/ants/ants-2.3.1_p20191013.ebuild @@ -11,14 +11,15 @@ DESCRIPTION="Advanced Normalitazion Tools for neuroimaging" HOMEPAGE="http://stnava.github.io/ANTs/" SRC_URI=" test? ( - http://chymera.eu/distfiles/ants_testdata-2.3.1_p20191013.tar.xz + http://chymera.eu/distfiles/ants_testdata-${PV}.tar.xz ) " EGIT_REPO_URI="https://github.com/stnava/ANTs.git" +EGIT_COMMIT="f78b2d4a382d3090230641b5ade5da28962dad04" SLOT="0" LICENSE="BSD" -KEYWORDS="" +KEYWORDS="~amd64 ~x86" IUSE="test vtk" DEPEND=" @@ -31,27 +32,28 @@ DEPEND=" RDEPEND="${DEPEND}" PATCHES=( - "${FILESDIR}/${PN}-2.3.1_p20191013-paths.patch" + "${FILESDIR}/${P}-logic.patch" + "${FILESDIR}/${P}-paths.patch" ) src_unpack() { git-r3_src_unpack if use test; then mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory." - tar xvf "${DISTDIR}/ants_testdata-2.3.1_p20191013.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data." + tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data." fi } src_configure() { local mycmakeargs=( -DUSE_SYSTEM_ITK=ON - -DITK_DIR="/usr/include/ITK-5.0/" + -DITK_DIR="${EROOT}/usr/include/ITK-5.0/" -DBUILD_TESTING="$(usex test ON OFF)" -DUSE_VTK=$(usex vtk ON OFF) -DUSE_SYSTEM_VTK=$(usex vtk ON OFF) ) use vtk && mycmakeargs+=( - -DVTK_DIR="/usr/include/vtk-8.1/" + -DVTK_DIR="${EROOT}/usr/include/vtk-8.1/" ) use test && mycmakeargs+=( -DExternalData_OBJECT_STORES="${S}/.ExternalData/MD5" @@ -65,6 +67,6 @@ src_install() { cd "${WORKDIR}/${P}/Scripts" || die "scripts dir not found" dobin *.sh dodir /usr/$(get_libdir)/ants - install -t "${D}"/usr/$(get_libdir)/ants * || die + install -t "${D}"/"${EROOT%/}"/usr/$(get_libdir)/ants * || die doenvd "${FILESDIR}"/99ants } diff --git a/sci-biology/ants/metadata.xml b/sci-biology/ants/metadata.xml index efbe326..87d2feb 100644 --- a/sci-biology/ants/metadata.xml +++ b/sci-biology/ants/metadata.xml @@ -2,7 +2,7 @@ - horea.christ@gmail.com + chr@chymera.eu Horea Christian