58 lines
1.4 KiB
Bash
58 lines
1.4 KiB
Bash
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# Copyright 1999-2018 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
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inherit distutils-r1 git-r3
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DESCRIPTION="Fast and easy statistical learning on NeuroImaging data"
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HOMEPAGE="http://nilearn.github.io/"
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SRC_URI=""
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EGIT_REPO_URI="https://github.com/setina42/nilearn"
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EGIT_BRANCH="TiledSlicer"
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LICENSE="BSD"
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SLOT="0"
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KEYWORDS=""
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IUSE="+plot test"
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DEPEND="
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test? (
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${RDEPEND}
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dev-python/nose[${PYTHON_USEDEP}]
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)
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dev-python/setuptools[${PYTHON_USEDEP}]
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"
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RDEPEND="
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dev-python/joblib[${PYTHON_USEDEP}]
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dev-python/numpy[${PYTHON_USEDEP}]
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sci-libs/scikits_learn[${PYTHON_USEDEP}]
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sci-libs/scipy[${PYTHON_USEDEP}]
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sci-libs/nibabel[${PYTHON_USEDEP}]
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plot? ( dev-python/matplotlib[${PYTHON_USEDEP}] )"
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# (Temporarily) commented out, since Gentoo sci-libs/scikits_learn decided it
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# is a mess to maintain system joblib usage
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#PATCHES=( "${FILESDIR}/0.4.1-bundled_joblib_test.patch" )
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python_prepare_all() {
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# upstream is reluctant to *not* depend on bundled scikits_learn:
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# https://github.com/nilearn/nilearn/pull/1398
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#local f
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#for f in nilearn/{*/*/,*/,}*.py; do
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# sed -r \
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# -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
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# -e 's/from (sklearn|\.|)\.externals import/import/' \
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# -i $f || die
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#done
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distutils-r1_python_prepare_all
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}
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python_test() {
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echo "backend: Agg" > matplotlibrc
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MPLCONFIGDIR=. nosetests -v || die
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}
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